| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1121 |
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| Symbol | |
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| ID | 6282634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1263549 |
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| End bp | 1264262 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642620680 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001894761 |
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| Protein GI | 187923119 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAGA TCATTCAGGA ATACTGGCGC AATTATCTCT ATACCGACGG CTACCGCCTC
ACCGGTGTCG TGATCACGCT GTGGCTGCTG GTGGTGTCGA TCGGGCTCGG CTTCTGCCTG
TCGATTCCGC TTGCAGTGGC GCGCGTGTCG AAGAAGAAGT GGCTCTCCAG GCTGGTGTGG
CTGTATACGT ATGTGTTCCG CGGCACGCCG TTGTATGTGC AACTACTGCT TTGCTATACC
GGCTTGTACA GCCTCGAGAT CATTCGCAAT CACGAACTCA CCAATGCGTT CTTCCGCGAC
GGCATGCATT GCACGCTGCT CGCTTTCACG CTGAACACCT GCGCGTACAC CACCGAGATT
TTCGCCGGCG CGATCAAGGC GACGCCGTAC GGCGAGATCG AAGCCGCGCG CGCGTACGGC
ATGTCGTCGT TTACGCTGTA CCGGCGCGTG ATTCTGCCGT CGGCCCTGCG CCGCGCATTG
CCCTACTACA GCAATGAAGT GATCCTGATG CTGCACGCCA CCACCGTCGC GTTCACCGCG
ACCGTGCCGG ACATCCTCAA GATCGCGCGC GACGTGAACT CCGCGACGTA TCAGTCGTTC
AACGCGTTCG GCATCGCCGC CCTGCTCTAT CTGTGCATTT CTTTCGCGCT CGTGTGGCTG
TTCCGCCGCG CCGAGCGCCG CTGGCTCGCT TACCTGCGGC CGCAAGGCAA GTAA
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| Protein sequence | MIEIIQEYWR NYLYTDGYRL TGVVITLWLL VVSIGLGFCL SIPLAVARVS KKKWLSRLVW
LYTYVFRGTP LYVQLLLCYT GLYSLEIIRN HELTNAFFRD GMHCTLLAFT LNTCAYTTEI
FAGAIKATPY GEIEAARAYG MSSFTLYRRV ILPSALRRAL PYYSNEVILM LHATTVAFTA
TVPDILKIAR DVNSATYQSF NAFGIAALLY LCISFALVWL FRRAERRWLA YLRPQGK
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