| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1115 |
|---|
| Symbol | |
|---|
| ID | 6281062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 1256906 |
|---|
| End bp | 1257235 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642620674 |
|---|
| Product | Excinuclease ABC C subunit domain protein |
|---|
| Protein accession | YP_001894755 |
|---|
| Protein GI | 187923113 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2827] Predicted endonuclease containing a URI domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTGGT TTCTCTATCT TCTTGAATGC TCGGACGGCA GCGTTTATAC CGGCATCGCC
GTCGATGTGC AGGCGCGCTT CGACAAACAC GTGAGTGGCG AAGGCGCGCG TTATACGCGT
TCGCGCAAGC CGGTGCAGGT GCTGGCGTCG TTCGAATTGA CGGATCGGTC TACTGCTTCG
CGCGCGGAGT ATTGGGTCAA GCGGTTGTCG CCTTCCGAGA AGCGGGCGCT TGCAGCGGGA
CTGCGCACGC TCGAATCGGT GATGCCATTG CCCGAACCCG AACCGGCTGT CGACGAAGAG
CAAGCTGAGG AAAAAACCGG CGCGTCCTGA
|
|---|
| Protein sequence | MAWFLYLLEC SDGSVYTGIA VDVQARFDKH VSGEGARYTR SRKPVQVLAS FELTDRSTAS
RAEYWVKRLS PSEKRALAAG LRTLESVMPL PEPEPAVDEE QAEEKTGAS
|
|---|
| |