| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1104 |
|---|
| Symbol | |
|---|
| ID | 6280978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 1242100 |
|---|
| End bp | 1243104 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642620663 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_001894744 |
|---|
| Protein GI | 187923102 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCCCG ATGCAGACAG CGGTGCGAAT GACGACCGTG CCGGCAAGGC ATCTCAAAGA
TATCAATGCC CGCGCTGTAC CGGGCCGTTC GCCGCCGTTC CTGAATCGTC CCGTGGTGGC
GCAGCAGGAC CGAGCGGTTA CCAGCTCGAA AACGTCAAGC CTGGCGTTTA CTGGATAAGC
GCTGGCGGAT ACGACACGAT GTTCCTTGTT ACCGGCGCCG GAGTAATCGC TGTCGACGCG
CCCCCCTCGT TGCGAGAAGT ATTATTGTCC GCCATAGCGT CCGTCACGGC GGAGCCAGTC
ACACACGTCA TCTATAGCCA TTCGCACTTC GACCACATCG GCGCAGCCGA TATCTACCCG
CAAAGCGCAG TCCGAATCGC ACACCAGTAC ACCGCGGAGA AGTTGGCGGG GTATAGCGAC
CCTCAGCGCC CGATTCCGAC AATCACTTTC AGCGACGAAT ATGTGCTGCA GCTAGGTGCT
GTAGAACTCG AACTCCGCTA TCACGGAAAC ATCCATCAGC CCGGCAACAT CTTCATATAC
GAACCGAAAC AAAAGGTCCT CATGCTCGTG GATGTCATTT TCCCAGGATG GGTACCCTTC
AGGAATCTGG CGGTTGCCAA TGACGTTCAC GAGTATTTGC ACGCCCACGA TCTGCTTCTC
GATTACGACT TCGACGTTAT GGTGTGTGGC CACCTTACGC GTTATGGCAC GCGTGCCGAT
GTCGTCACAC AGAAGGAGTT CGCGCAGCAA CTGCGCGCGG CGTCCATGAA GGCGTTGAGG
TCTGTACGAA TTGAAGACGT GGCCGCACGG ACGGGGACCG ACAATCTGTG GGCGCTGATG
GACGGCTATC TGGAAGACGC AATCGAAACT GTCACTAACG AGATGCTCAC GACTCCGACT
GCCGACGGAC GGCTGTGGAC CGACAGGCTG GGAGGTGCAG ACATATGGAC CAGGCACCAT
GCCTTTTCCA TGATTCAGGC ACTGCGCGTT GAAAGACCCG ATTAG
|
|---|
| Protein sequence | MFPDADSGAN DDRAGKASQR YQCPRCTGPF AAVPESSRGG AAGPSGYQLE NVKPGVYWIS
AGGYDTMFLV TGAGVIAVDA PPSLREVLLS AIASVTAEPV THVIYSHSHF DHIGAADIYP
QSAVRIAHQY TAEKLAGYSD PQRPIPTITF SDEYVLQLGA VELELRYHGN IHQPGNIFIY
EPKQKVLMLV DVIFPGWVPF RNLAVANDVH EYLHAHDLLL DYDFDVMVCG HLTRYGTRAD
VVTQKEFAQQ LRAASMKALR SVRIEDVAAR TGTDNLWALM DGYLEDAIET VTNEMLTTPT
ADGRLWTDRL GGADIWTRHH AFSMIQALRV ERPD
|
|---|
| |