| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1093 |
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| Symbol | |
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| ID | 6283698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1233097 |
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| End bp | 1234416 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642620653 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001894734 |
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| Protein GI | 187923092 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAGTC CCGCAAATCC GCTCCACCAT CCCGGCGCGG GTGCGCCGCC TTCCACTTTC
GAAGAGGCCA CCTACCGCAA GGTCAGCTGG CGGCTCGCGC CGCTTCTCAT GCTCTGTTAC
GTGGTCGCGT ACCTGGATCG CGTCAACGTC GGTTTCGCCA AGCTGCAAAT GACCAGCGAT
CTTGGGCTGA GCGATGCGGT GTATGGTTTC GGCGCCGGGA TTTTCTTTGT CGGCTATTTC
ATCTTCGAGA TTCCGAGCAA TGTGATTTTG CATAAGGTCG GCGCGCGGGT GTGGATTGCG
CGGATCATGG TGTCGTGGGG CGTGATCTCC ATGCTGACCA TGTTCGTTAC TACGCCGACG
ATGTTTTATG TGATGCGCTT TCTGCTTGGT CTGGCCGAGG CGGGGTTCTT TCCTGGGATC
ATTCTTTATC TCACGTACTG GTATCCGGCG CATCGGCGTG GCCGCATGAC TACGTGGTTT
ATGACGGCGA TTGCGTTGTC GGGCGTGATC GGCGGGCCGG TGTCGGGTTA TATCCTGAAG
ACCTTTAACG GCATGAACGG CTGGCATGGC TGGCAGTGGC TGTTTTTGCT CGAAGGGATT
CCTTCGGTAA TCGTCGGGAT CATGGTTTTT ACCATGCTGG ACGATCGGAT TTCGAAGGCG
AAGTGGCTGA CCAAGGAAGA ACAGCAGTTG CTTGAACGGC ATGTTTCTGC GGAAGAGGCG
ACCAAGCATG ACATGCCGAT TCGGCAGGTG CTGACGAGTG GGCGTGTGTT GATGCTCAGT
CTTACGTACT TCTCGTTTGT GATGGGGTTG TATGGGGTGA GCTTCTGGTT GCCGACGATT
ATTAAGGCTA CCGGGGTGAC GGATGCGTTC ATGATTGGGT TGCTGTCGGC GATTCCGTTT
GCGGGGGCTG TCGTGGCGAT GGTGTTTGTG TCGCGTAGCG CGGACCGGAA GCGGGAGCGG
CGTTGGCATA TCGCGCTGCC GGCGTTTGCG GGGGCGGTTG GGTTGGTGCT TTCTGTGGTT
TGGGCGCATA ACACTGTGCT GGCGATGGCT TCGCTTACTC TCGCGACCAT GGGTATTCTC
ACTACGCTGC CGCTGTTTTG GAGTTTGCCT ACGGCGATCC TCGCCGGCAC GGGCGCCGCT
GCCGGCATTG CCATGATCAA CTCGATCGGC AATTTGGCAG GTTTTCTGAG TCCGTACGCG
GTGGGCTGGC TCAAGCAAGC GACTGCCGCG AATGACTCCG GCATGTATAT GCTGGCGGCG
TTCATGGTGC TCGGCGGGTT GCTGGCGATT AGTGTGCCGG CGAAGATGGT GAATAAGTGA
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| Protein sequence | MASPANPLHH PGAGAPPSTF EEATYRKVSW RLAPLLMLCY VVAYLDRVNV GFAKLQMTSD
LGLSDAVYGF GAGIFFVGYF IFEIPSNVIL HKVGARVWIA RIMVSWGVIS MLTMFVTTPT
MFYVMRFLLG LAEAGFFPGI ILYLTYWYPA HRRGRMTTWF MTAIALSGVI GGPVSGYILK
TFNGMNGWHG WQWLFLLEGI PSVIVGIMVF TMLDDRISKA KWLTKEEQQL LERHVSAEEA
TKHDMPIRQV LTSGRVLMLS LTYFSFVMGL YGVSFWLPTI IKATGVTDAF MIGLLSAIPF
AGAVVAMVFV SRSADRKRER RWHIALPAFA GAVGLVLSVV WAHNTVLAMA SLTLATMGIL
TTLPLFWSLP TAILAGTGAA AGIAMINSIG NLAGFLSPYA VGWLKQATAA NDSGMYMLAA
FMVLGGLLAI SVPAKMVNK
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