Gene Bphyt_1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1092 
Symbol 
ID6283697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1232099 
End bp1232803 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content55% 
IMG OID642620652 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_001894733 
Protein GI187923091 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCC ACGTACAACG CTATAGACCA CAACTTGCAA CATCACCGTG GTTCAAGGAT 
TTACCGATCG AGCTTCAGGA CTATCTTGTC GCTCACGCCG ACCTGCTTCG ACTAAAGAAG
GGGCAACAGC TTTATCGGCG CGGCGAACAG TCGTTCGGCA TGTACGCCGT TCTCGACGGT
GCATTGTCCA TCGGCACCGT TGGAGCGGAT GGAAAAGAGG CGCTGCTCGC CGTACTTGGG
CCGACCGCGT GGATCGGGGA AATCTCGATG TTCGACGGGC TGCCTCGACC GCACGATGCC
TCAGCAATAA GTGAGACTCT CGTGCTTCAC GTACCCGGTC CCGCGCTGGA AAGCCTGCTT
AAGGCTAACC CTGCTTACTG GCGAAATTTT GGGTTGTTGA TGGCGCAAAA AATCCGAATC
TCCTTCGAAA ACAACGAAGC CATGATTCTG CTGCCCGCCG CTCAACGCCT GGCAAGTCGC
TTATTGCTGA TCGCTGGTGG CTACGGAGGG ATCAATGCCG AACGGAGCAG GATAAAGCTC
TCGCAAGACA CCTTGGCTTC AATGGTTTCG CTTACGCGGC AGACGACGAA CCAGCTGCTC
AAGAACCTCG AGAGTCAGGG TATCGTCGAT CTGAGGTTCG GGGAAATCGT TATTCTTGAT
TTCGATCGCT TGCATGCTGC CAGCGTCGAA GCTCCCGGCC CTTGA
 
Protein sequence
MNSHVQRYRP QLATSPWFKD LPIELQDYLV AHADLLRLKK GQQLYRRGEQ SFGMYAVLDG 
ALSIGTVGAD GKEALLAVLG PTAWIGEISM FDGLPRPHDA SAISETLVLH VPGPALESLL
KANPAYWRNF GLLMAQKIRI SFENNEAMIL LPAAQRLASR LLLIAGGYGG INAERSRIKL
SQDTLASMVS LTRQTTNQLL KNLESQGIVD LRFGEIVILD FDRLHAASVE APGP