Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1092 |
Symbol | |
ID | 6283697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1232099 |
End bp | 1232803 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642620652 |
Product | transcriptional regulator, Crp/Fnr family |
Protein accession | YP_001894733 |
Protein GI | 187923091 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCCC ACGTACAACG CTATAGACCA CAACTTGCAA CATCACCGTG GTTCAAGGAT TTACCGATCG AGCTTCAGGA CTATCTTGTC GCTCACGCCG ACCTGCTTCG ACTAAAGAAG GGGCAACAGC TTTATCGGCG CGGCGAACAG TCGTTCGGCA TGTACGCCGT TCTCGACGGT GCATTGTCCA TCGGCACCGT TGGAGCGGAT GGAAAAGAGG CGCTGCTCGC CGTACTTGGG CCGACCGCGT GGATCGGGGA AATCTCGATG TTCGACGGGC TGCCTCGACC GCACGATGCC TCAGCAATAA GTGAGACTCT CGTGCTTCAC GTACCCGGTC CCGCGCTGGA AAGCCTGCTT AAGGCTAACC CTGCTTACTG GCGAAATTTT GGGTTGTTGA TGGCGCAAAA AATCCGAATC TCCTTCGAAA ACAACGAAGC CATGATTCTG CTGCCCGCCG CTCAACGCCT GGCAAGTCGC TTATTGCTGA TCGCTGGTGG CTACGGAGGG ATCAATGCCG AACGGAGCAG GATAAAGCTC TCGCAAGACA CCTTGGCTTC AATGGTTTCG CTTACGCGGC AGACGACGAA CCAGCTGCTC AAGAACCTCG AGAGTCAGGG TATCGTCGAT CTGAGGTTCG GGGAAATCGT TATTCTTGAT TTCGATCGCT TGCATGCTGC CAGCGTCGAA GCTCCCGGCC CTTGA
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Protein sequence | MNSHVQRYRP QLATSPWFKD LPIELQDYLV AHADLLRLKK GQQLYRRGEQ SFGMYAVLDG ALSIGTVGAD GKEALLAVLG PTAWIGEISM FDGLPRPHDA SAISETLVLH VPGPALESLL KANPAYWRNF GLLMAQKIRI SFENNEAMIL LPAAQRLASR LLLIAGGYGG INAERSRIKL SQDTLASMVS LTRQTTNQLL KNLESQGIVD LRFGEIVILD FDRLHAASVE APGP
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