| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1088 |
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| Symbol | |
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| ID | 6281954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1228155 |
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| End bp | 1229153 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642620648 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001894729 |
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| Protein GI | 187923087 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGA CCGACAATTC GGACGGACAA GTGCCTCGCA AGGTTGTCAT CGTCGCTTAT
GACGGTGCCA AGCTGATGGA CATATCCGGT CCACTGCAAG CATTCAGCGA CGCCTGCTTT
GAAGATGGTC GTCCCGCCTA TCAGGTCGTT CTTGCCTCCG AGGCGGGCGG TCCGGTCTCC
ACCGATACTC GCGTGAAGCT GGAAACCGTA CGGCTCGACG ACGCAGTGAT CGACTCCGTC
GACACGCTGC TCGTTGCCGG CGCAGACCTG ATCATGCCCG CTGCCGCGAC TGCATCGCTT
CGGGCGAGAC TCGTGAGTTA TCTCGACCGG CCTCGTCGGC TCGGCTCCGT CTGCACGGGC
GCGTTCGTCC TCGCCCAGTT GGGCGTGCTG GATCGCCGCG ATGCGACGAC ACATTGGGCT
GCGTGCAGCC GGCTCGAGAA CCAGCACCCG ACCATCAACG TCAAGCCAGA CGCGATTTTT
GTCACCTCCG ATCATATCTG GACATCGGCC GGTGTCTCCG CTGGGATTGA CATGGCGCTG
GCAATGATCG AGGACGATCT GGACCACCTC GCGGCGCTCA ATGTGGCGCG CGGCATGGTT
CTTTTTCTCA AGCGGCCGGG CGGTCAATCG CAGTTCAGCA TGGAACTGCG GCAGCAGATG
CGCGACGCGC GCGGTCGGTT CGACGACCTT CACGATTGGA TTCGAACCCA TCTCGAAGCG
GACTTATCGA TTCCGGCACT CGCGGACGCA GCACGGATGA GCCCACGCAA CTTCGCTCGT
GTCTATCTTC GCGAAACCGG GGAAAGCCCC GCGCGAGCCG TCGAGAAGAT CCGCATAGAA
GCGGCCAGAC GCCTGCTCGA ATCCGCGCGG GATCCTATTC AGGTCATCGC GCGTCGGACC
GGTTTTGGAG ATGACGAACG GATGCGCCGG GCATTCGCAA AAGTTTATGG CGTGTCTCCG
CAGGACTATC GCAGCCGCTT CGGACAGCCG AAGTCTTGA
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| Protein sequence | MAKTDNSDGQ VPRKVVIVAY DGAKLMDISG PLQAFSDACF EDGRPAYQVV LASEAGGPVS
TDTRVKLETV RLDDAVIDSV DTLLVAGADL IMPAAATASL RARLVSYLDR PRRLGSVCTG
AFVLAQLGVL DRRDATTHWA ACSRLENQHP TINVKPDAIF VTSDHIWTSA GVSAGIDMAL
AMIEDDLDHL AALNVARGMV LFLKRPGGQS QFSMELRQQM RDARGRFDDL HDWIRTHLEA
DLSIPALADA ARMSPRNFAR VYLRETGESP ARAVEKIRIE AARRLLESAR DPIQVIARRT
GFGDDERMRR AFAKVYGVSP QDYRSRFGQP KS
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