Gene Bphyt_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1079 
Symbol 
ID6281140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1220387 
End bp1220890 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content46% 
IMG OID642620641 
Productprotein of unknown function DUF1311 
Protein accessionYP_001894722 
Protein GI187923080 
COG category[S] Function unknown 
COG ID[COG3755] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.523382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGAC ACATCAAAAA ATCTGCTGCG TCAATTTTGA TGCTTCTGGT CCCTCTGTTG 
TTTCATTCCA CTGCGTCTGG AAAAACGATC TACTCCGTCG GGTTTGACTA TAGAAAGGCT
GTGCCATCAT CGGTGTATTT TGCTGGAAAA TCGCACAAAG AGGTTGACCA CCTTTGCGAG
ACGGGCGAAC ACGCATCAAC CGCTGACATT GCTGCGTGCA GCCAAAGGGA CTACGAAATA
ATTTTTGCGA AACTGAAGTC GAAAATTAAA TCATTGGAAG ACGGTTTTAA AAAAGACGAT
GCCGAACTGA AAGCCGAGGA CAATCCTATC GCATCGCCAT ATTTCGAGAA AGGCCAAAAC
GCATGGATCG AGTTTCGTGA CAACCAGTGC TACGCCGAAA CGTACTCGTT AGGGGAGGCA
TCAATGCGTT ATATGACGTT TTGGGATTGC ATGGCCCGTA TAACCAGAGA AAGGTTAGAT
GATCTGGACA GCGCAAAAGA CTGA
 
Protein sequence
MMRHIKKSAA SILMLLVPLL FHSTASGKTI YSVGFDYRKA VPSSVYFAGK SHKEVDHLCE 
TGEHASTADI AACSQRDYEI IFAKLKSKIK SLEDGFKKDD AELKAEDNPI ASPYFEKGQN
AWIEFRDNQC YAETYSLGEA SMRYMTFWDC MARITRERLD DLDSAKD