Gene Bphyt_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1078 
Symbol 
ID6281672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1217523 
End bp1218692 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content66% 
IMG OID642620640 
Productputative transposase 
Protein accessionYP_001894721 
Protein GI187923079 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAGG TTGCGGACAT CTTCCGCAGC CACGGGCCGG CGTGGCGAGC CACGACACAT 
CTGAGCCTGG GGCAGCTGAA GGTCATGTCG GCCATCGAAC GGTGCCGCAC CGCGGCACTG
GGCGGACATG TGCTGCGCTG TTCAGGCTGC ACAATGACAG AGGTGTCCTT CAACTCGTGC
CGGAACCGGC ATTGCCCGAA GTGCCAGGCC AGTGCCGCAC ACCGCTGGCT GGAGGCACGC
CAGGCCGATC TGCTACCTGT CGAGTACTTC CACGTCGTCT TCACGCTTCC CGCACCCATC
AGCGCCATCG CCTGCTATAA CAAACGGATC ATCTACGGCC TGCTGCTCGA CATCGCCGCT
GACACGCTGC GCACGATCGC CGGGGATCCC AGGCATCTCG GCGCCCAGAT TGGCGCCACG
CTCGTACTGC ACACCTGGGG CTCGGCGCTG ACGCATCACC CGCATGTGCA CGGCATCGTA
CCCGGTGGCG GACTGTCGCC TGACGGTGAG CGCTGGATCG CCTGCCGCCC CGGCTTCTTC
CTGCCCGTGC GCGTCCTCTC ACGCCTGTTC CGGCGCCGCT TCCTCGAAGC ACTCGCAGAC
GCCCACAGGC GCGGCCAGTT GCAGTTCTTC GGCGAGTACA CCGGCCTCGC TGATCCCGCT
ACCTTTGCCC GGTGGCTTGC GCCGCTACGT ACCTGCGAAT GGGTGGTCTA CGCCAAACGC
CCGTTCGCCG GACCGGAAGC GGTGCTCGAG TACCTCTCAC GCTACACGCA CCGCGTCGCC
ATCTCCAACC AGCGCCTCGT CGCCTTCGAT GAGCGCGGTG TGACGTTCCG CTGGAAGGAC
TACCGTGCAA AGGGACGCAC CCGCTACAAG ACCATGACCC TCGAAACCGG CGAATTCATG
CGCCGCTTCC TGCTCCATGT GCTGCCCAGT GGCTTCCATC GCATCCGTCA CTACGGATTG
CTCGCCAACC CGGTGCGCCG CGCCAGACTC GCGCGGGTGC GCGATCTGCT GCACATCGCA
CCCGCGACCA GCCCATCACC GGACCACGCC ATCATCGAAA CCCGGCCCGT CTTCATCTGC
CGGCACTGCG GCGCACCGAT GATCGTCATC GACATCCTCG CGCGCAGCGC CCCGATCCGC
GCACCGCCCA TGCGCCTGGA TCAGCCATGA
 
Protein sequence
MLEVADIFRS HGPAWRATTH LSLGQLKVMS AIERCRTAAL GGHVLRCSGC TMTEVSFNSC 
RNRHCPKCQA SAAHRWLEAR QADLLPVEYF HVVFTLPAPI SAIACYNKRI IYGLLLDIAA
DTLRTIAGDP RHLGAQIGAT LVLHTWGSAL THHPHVHGIV PGGGLSPDGE RWIACRPGFF
LPVRVLSRLF RRRFLEALAD AHRRGQLQFF GEYTGLADPA TFARWLAPLR TCEWVVYAKR
PFAGPEAVLE YLSRYTHRVA ISNQRLVAFD ERGVTFRWKD YRAKGRTRYK TMTLETGEFM
RRFLLHVLPS GFHRIRHYGL LANPVRRARL ARVRDLLHIA PATSPSPDHA IIETRPVFIC
RHCGAPMIVI DILARSAPIR APPMRLDQP