Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1064 |
Symbol | |
ID | 6282414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 1198598 |
End bp | 1199140 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642620626 |
Product | TonB family protein |
Protein accession | YP_001894707 |
Protein GI | 187923065 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.381212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCACTC GCACGCGTCA CCTTCGCCCT TGCAACGAAC GCGGCGTTTG CAGCGTCGGC GGATGGCCCG CGCATGTGCG CGGCATGCTC CTCGTAGTCG GCCTGGTTAT CGGCATCGGC ATGGCGGGCT GCACCATCAC ACCGCCGCCA CGCGCCAGCG TGCCGACGCC CGCTGCCGCC ATCAACAGCG CGACGCTCGA CCAGTACCGC GATGCCGTGG CCAGACGCAT CCTCGAACGC AATCCGTCTT ATGTGCTGCG CGGCACGCCG CAAGCGATGC TGCGCTCGCT GGTCGTGGTC TCGTTCACGG TGGATAGTAA TGGCCGCGTG CTGGAGTCGT CGGTGTATCG CACCAACGGC GACGACGAAG CCGAAAGCAC CGCGCTCGCC AGCTTGCGGC GCGCCGCGCC GCTGCCGCAG CCGCCCGGCA AATTGCTGAA CGGCCGTGGC CAGCTCGAGC TATTCGAAGA CTGGCTGTTC AACGACAACG GCAAATTCCA GCTTCGCGAG TTCGCCTCGC CGCAAGCGCA GACCATCGAT TGA
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Protein sequence | MFTRTRHLRP CNERGVCSVG GWPAHVRGML LVVGLVIGIG MAGCTITPPP RASVPTPAAA INSATLDQYR DAVARRILER NPSYVLRGTP QAMLRSLVVV SFTVDSNGRV LESSVYRTNG DDEAESTALA SLRRAAPLPQ PPGKLLNGRG QLELFEDWLF NDNGKFQLRE FASPQAQTID
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