Gene Bphyt_1064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1064 
Symbol 
ID6282414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1198598 
End bp1199140 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content66% 
IMG OID642620626 
ProductTonB family protein 
Protein accessionYP_001894707 
Protein GI187923065 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.381212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACTC GCACGCGTCA CCTTCGCCCT TGCAACGAAC GCGGCGTTTG CAGCGTCGGC 
GGATGGCCCG CGCATGTGCG CGGCATGCTC CTCGTAGTCG GCCTGGTTAT CGGCATCGGC
ATGGCGGGCT GCACCATCAC ACCGCCGCCA CGCGCCAGCG TGCCGACGCC CGCTGCCGCC
ATCAACAGCG CGACGCTCGA CCAGTACCGC GATGCCGTGG CCAGACGCAT CCTCGAACGC
AATCCGTCTT ATGTGCTGCG CGGCACGCCG CAAGCGATGC TGCGCTCGCT GGTCGTGGTC
TCGTTCACGG TGGATAGTAA TGGCCGCGTG CTGGAGTCGT CGGTGTATCG CACCAACGGC
GACGACGAAG CCGAAAGCAC CGCGCTCGCC AGCTTGCGGC GCGCCGCGCC GCTGCCGCAG
CCGCCCGGCA AATTGCTGAA CGGCCGTGGC CAGCTCGAGC TATTCGAAGA CTGGCTGTTC
AACGACAACG GCAAATTCCA GCTTCGCGAG TTCGCCTCGC CGCAAGCGCA GACCATCGAT
TGA
 
Protein sequence
MFTRTRHLRP CNERGVCSVG GWPAHVRGML LVVGLVIGIG MAGCTITPPP RASVPTPAAA 
INSATLDQYR DAVARRILER NPSYVLRGTP QAMLRSLVVV SFTVDSNGRV LESSVYRTNG
DDEAESTALA SLRRAAPLPQ PPGKLLNGRG QLELFEDWLF NDNGKFQLRE FASPQAQTID