| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1050 |
|---|
| Symbol | |
|---|
| ID | 6282492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 1185329 |
|---|
| End bp | 1186654 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642620612 |
|---|
| Product | Mn2+/Fe2+ transporter, NRAMP family |
|---|
| Protein accession | YP_001894693 |
|---|
| Protein GI | 187923051 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
|---|
| TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAG CGATAAGCCA GGGCACCGTG CCGCAGACTC TCACCGAGCA GACCTGTTTC
GACATTCGCG AAACGCTGGC GGGAAGGCGC CGTGGCGTGC GCGCGATGCT GCCGTTCGTC
GGGCCGGCGG TGGTGGCGTC GATCGCGTAC ATGGACCCGG GCAACTTCGC CACCAACATC
CAGGCGGGCG CGGGATACGG CTATACGCTG CTGTGGGTCG TGGCGGTCGC GAATGTCGTC
GCGATGCTGT TCCAGTCGCT GTCGGCCAAG CTCGGTCTCG TCACCGGGCG CAATCTCGCC
GAGTTATGCC GCGAAGCGCT GCCACGCCGC TCCGTGCTCG CGATGTGGGG CATCAGCGAA
ATCGCGGCGA TGGCGACCGA TCTGGCCGAG TTCGTCGGCG GCGCGATCGG CGTGTCATTG
CTCACGCATC TGCCGATGAT ACCGAGCATG CTGATCACCG CAGCCGTCAC GTATGGCTTG
CTGCAATTCG AAAAGCGCGG CTTCCGCCCG CTCGAACTGG CGATCGCGGC GTTGATCGGC
GTAATCGGAT TATCTTATCT TGCCGAGTTG CTGATCGCAC CGGTGCATTG GCCATCGGTG
GTCGCGCACA CGTTCACGCC GCGTGTGCCG GATAGCAATG CGTTGACGAT ATCGGTCGGC
ATTATCGGCG CCACGGTCAT GCCGCATGTG CTGTTCCTGC ATTCGGGGCT CACGCAGAAT
CGCGTGAAAC CGCGCAACGA CGGCGAGCGC GCGAGGCTGC TGCGCTTTTC CAATATCGAA
GTGGTGGTCG CGCTCGGCGT GGCCGGGTTC ATCAACATGG CGATGGTGAT CATGGCCTCG
AGCGCGTTTC ATGCAGGGCA CCCGGAGATC GCCAGCATCG AGACCGCGTG GCGCACGCTC
ACGCCGCTGC TCGGCGGCGC CGCGGCGGGA CTCTTTCTGG CCGCGTTGAT CGCGTCGGGC
GTGTCGAGTT CAGTGGTCGG CACGATGGCT GGGCAAATGA TCATGCAGGG CTTCGTCGGC
TTTCATATTC CCGTGTGGGC CCGGCGCTTG ATCACGATGG CGCCGGCTTT CGCGGTAGTG
GCCTGCGGCG TCGACGCGAC GCGCGCCCTG GTGCTGAGCC AGGTGGTGCT CAGCATCGCC
CTGCCCGTGC CGATGATCGC GCTCGTGTGG TTCACCTCGC GCGGCGACCT GATGGGCCGC
TACCGGAATC GTCGTGCGAC GACCTTCGCG GCGATTCTCG GCACGGTCGT CGTGCTGGCG
CTCAATCTCA TTCTGCTGCT GCAGGCGGCC GGCATTTCGC CGTGGCCGCC GTTTCATGCC
GCGTGA
|
|---|
| Protein sequence | MNEAISQGTV PQTLTEQTCF DIRETLAGRR RGVRAMLPFV GPAVVASIAY MDPGNFATNI
QAGAGYGYTL LWVVAVANVV AMLFQSLSAK LGLVTGRNLA ELCREALPRR SVLAMWGISE
IAAMATDLAE FVGGAIGVSL LTHLPMIPSM LITAAVTYGL LQFEKRGFRP LELAIAALIG
VIGLSYLAEL LIAPVHWPSV VAHTFTPRVP DSNALTISVG IIGATVMPHV LFLHSGLTQN
RVKPRNDGER ARLLRFSNIE VVVALGVAGF INMAMVIMAS SAFHAGHPEI ASIETAWRTL
TPLLGGAAAG LFLAALIASG VSSSVVGTMA GQMIMQGFVG FHIPVWARRL ITMAPAFAVV
ACGVDATRAL VLSQVVLSIA LPVPMIALVW FTSRGDLMGR YRNRRATTFA AILGTVVVLA
LNLILLLQAA GISPWPPFHA A
|
|---|
| |