Gene Bphyt_1048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1048 
Symbol 
ID6282796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand+ 
Start bp1183494 
End bp1184042 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content65% 
IMG OID642620610 
Producthypothetical protein 
Protein accessionYP_001894691 
Protein GI187923049 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.419556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.928595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATGCA GTTCGTGCTT TCGCAAGCGG ACTGACGTGC GCGCCTTCGT CGCTCTCGTC 
CTGGCGTTGT GGGTGAGCGC CGCTTGCGCG GACTGGCGCG GCGACGTCCA GTCCGCGCAA 
CTCGTTGGCG AAGGCGATTT CAGCGTGCTC GGCTTCCGGC TCTATCGCGC GCAGATGTGG 
AGCGAACGCG TGCCGGTCGA TTACGACGCC CGCTTCGCGC TGCACATCGT GTACGCGCGC 
GGCATCAAAC GCGAGCGCCT CGCGGACACT GGTATCAGCG AGATCAAGCG TTTGGCTGGC 
GTGCCGATTC CGGCCGACAC GCTGGAGCGC TGGCGCGCGG ATATGCTGCA GGCCTTCGTG 
GATGTCAGCC CCGGCGACCA GTTGAGCGCG GTGTATCTGC CGGACAAAGG CGTGCGTTTT 
TATGCCGGCG AGCGCATGAC CGGCGAGTTC GACGATCCCG CCTTCGCGCG TGCATTCTTC 
GGCATCTGGC TCGATCCTTC GACGCGCGCG CCTACTTTGC GCAAGCAGTT GCTTGGCACG 
GCGCCGTAG
 
Protein sequence
MSCSSCFRKR TDVRAFVALV LALWVSAACA DWRGDVQSAQ LVGEGDFSVL GFRLYRAQMW 
SERVPVDYDA RFALHIVYAR GIKRERLADT GISEIKRLAG VPIPADTLER WRADMLQAFV 
DVSPGDQLSA VYLPDKGVRF YAGERMTGEF DDPAFARAFF GIWLDPSTRA PTLRKQLLGT 
AP