Gene Bphyt_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1046 
Symbol 
ID6282794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1181453 
End bp1182304 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID642620608 
Productprotein of unknown function DUF1365 
Protein accessionYP_001894689 
Protein GI187923047 
COG category[S] Function unknown 
COG ID[COG3496] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.616737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGT CGACCGACAA AGCCGGCGCA GATCCAGCAG CCTGGCTTCT GACCGGCAAG 
GTGATGCACG AACGTCTGCG TCCAAAACAT CATCGCTTCA CCTATCCGGT GTTTTACGTG
CGATGCGACC TGGATCGGCT GGCCTCGCTC GACAGCGGGT GGTTCGGCAT CGACCGCTGG
CGGCCGCTCA GCCTGTATCG ACGCGACCAC GGTCCGCGCG ACGGCAGCGA CCTCGCCACA
TGGATGCGCG AGCAACTACG TGCCGCGGGC ATTGAAGAAG CGAACGGCCG GATCTGGCTG
CAAGCTTTCC CGCGCGTGTT TGGCTACGCG TTCAATCCGG TCAGTTTCTG GCATTGCCAC
GACCGCGACG GCCAACTGCG CGCGCTGCTG GCCGAAGTGC GCAACACGTT CGGCGAGCGC
CACAGCTATC TGCTCAGTGC AAGCGGCAAC GCGCCGATCA CGGCAAGCAC GCGGCTCATG
TGCCGCAAAG TGCTGCACGT GTCGCCGTTT TGCCGTGTGG AAGGCGGCTA CACCTTTCGC
GTCACTGAAG CGCCCGGTGG CGCGTCGGTC TCCATCGACT ATCACGACGC CGACGGTCTG
CTGATTCGCA CCGCGCTCGG CGGCCGCCTG ACGCCGCTCA CGCGCGCGGC CGCGTGCGCC
GCGCTGCTGC GTCAGCCGCT CCTGACCGTG GGCGTCGTCG CGAGAATTCA CTGGCAAGCG
TTGCGCCTTG CCCTGAAGAA AGCGCCGTTC CACGGCAAAA ACCCCGCGCC GGCCCGCACC
GGCGACGCGT CCACCCACCA CGCCGCAGCC GCCAAACCAT CCGCCGCCGC GCGCCCCATT
TCGTCCGATT GA
 
Protein sequence
MKPSTDKAGA DPAAWLLTGK VMHERLRPKH HRFTYPVFYV RCDLDRLASL DSGWFGIDRW 
RPLSLYRRDH GPRDGSDLAT WMREQLRAAG IEEANGRIWL QAFPRVFGYA FNPVSFWHCH
DRDGQLRALL AEVRNTFGER HSYLLSASGN APITASTRLM CRKVLHVSPF CRVEGGYTFR
VTEAPGGASV SIDYHDADGL LIRTALGGRL TPLTRAAACA ALLRQPLLTV GVVARIHWQA
LRLALKKAPF HGKNPAPART GDASTHHAAA AKPSAAARPI SSD