Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1044 |
Symbol | |
ID | 6282808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1178342 |
End bp | 1179637 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642620605 |
Product | seryl-tRNA synthetase |
Protein accession | YP_001894687 |
Protein GI | 187923045 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.682379 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGACA TTCAGCTGCT GCGCAAAGAC CTCGACGGCG TCGCCAAACG CCTCGCCGAC CGCGGCTATA CCCTCGACGT GGCGGCCTTC GCCGCGCTCG AAGCGGAACG CCGCGAGACC CAGACCCGTA CCGAAGAGAT GCAGGCGCGC CGCAATAGCC TCTCGAAGCA GATCGGCGCG ATGAAAGGCA AGGGCGAGGA CACCTCGGCG GTGATGGCCG AAGTGGGCGG TATCGGCGAC GAGATGAAGG CGTCGGCGGC TAAGCTCGAC GATATCCAGA AGCGTTTGTC GGAACTGCTG CAAGGCGTGC CGAATCTGCC GCATGAAAGC GTGCCGATGG GCAAGGACGA AACCGGCAAC GTCGAAGTGC GCCGCTGGGG CACGCCGCGC CAGTTCGATT TCGAGGTGAA GGATCACGTC GATGTCGGCA CGCCGCTCGG CCTCGACTTC GAGACCGGCG CGAAGCTCTC GGGCGCGCGT TTCACGATGT TGCGCGGCCA GATTGCGCGG CTGCATCGCG CGCTCGCGCA GTTCATGATC GACACGCACA CGCAGCAGCA CGGCTATACG GAGGTCTACA CGCCGTACAT CGTGAATCCG GAAATTCTGT ACGGCACCGG CCAACTGCCC AAGTTCGCCG ACGACATGTT CCGCGTCGAG AAGGGCGGCG ATGAGAACAC GGTCACGCAG TATCTGATCT CCACGTCGGA GATTTCGCTG ACGAACACGG TGCGCGACAG CATCCTCGAA GCGGACGCGT TGCCGATCAA GCTGACCGCG CATTCGCCGT GCTTCCGCTC GGAAGCGGGC TCGTACGGCC GCGACACGCG CGGTCTGATC CGCCAGCATC AATTCGACAA GGTCGAGATG GTGCAGATCG TCGCGCCGGA AACGTCGTAC GCCGCGCTGG AAGAAATGGT CGGCCACGCT GAGACGATTC TGCAGAAGCT GGAACTGCCG TACCGCGTGA TCACGCTGTG CACGGGCGAC ATGGGCTTCT CGGCGGCCAA GACGTACGAC CTGGAAGTGT GGGTGCCGGC GCAGAACACG TATCGCGAAA TCTCGAGCTG CTCGAACACG GAATCGTTCC AGGCTCGCCG CATGCAGGCG CGTTATCGCA ATGCGCAGGG CAAGCCGGAA CTGGTGCACA CGCTGAACGG CTCGGGTCTG GCCGTGGGCC GTACGCTCGT GGCGGTGCTC GAGAACTTCC AGAACGCCGA TGGTTCGGTC ACCGTGCCGG CGGCGTTGCG TCCGTATCTG GGCGGCATTG AACGGCTGGA AGTCGCGGCT GGATGA
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Protein sequence | MLDIQLLRKD LDGVAKRLAD RGYTLDVAAF AALEAERRET QTRTEEMQAR RNSLSKQIGA MKGKGEDTSA VMAEVGGIGD EMKASAAKLD DIQKRLSELL QGVPNLPHES VPMGKDETGN VEVRRWGTPR QFDFEVKDHV DVGTPLGLDF ETGAKLSGAR FTMLRGQIAR LHRALAQFMI DTHTQQHGYT EVYTPYIVNP EILYGTGQLP KFADDMFRVE KGGDENTVTQ YLISTSEISL TNTVRDSILE ADALPIKLTA HSPCFRSEAG SYGRDTRGLI RQHQFDKVEM VQIVAPETSY AALEEMVGHA ETILQKLELP YRVITLCTGD MGFSAAKTYD LEVWVPAQNT YREISSCSNT ESFQARRMQA RYRNAQGKPE LVHTLNGSGL AVGRTLVAVL ENFQNADGSV TVPAALRPYL GGIERLEVAA G
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