| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1041 |
|---|
| Symbol | |
|---|
| ID | 6282805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1174027 |
|---|
| End bp | 1175016 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642620602 |
|---|
| Product | agmatinase |
|---|
| Protein accession | YP_001894684 |
|---|
| Protein GI | 187923042 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
|---|
| TIGRFAM ID | [TIGR01230] agmatinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.287575 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.4882 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACTT CTTCCTTCAT TTCCCCAGAA GCCGGCGAAC GGCCGCAACC GCTGTCCGGC
AACGCCATGC CCCGCTGCGG CGGCATCGCG ACGATGATGC GGCTGCCGAA CGTCGGCTCG
GCCGAAGGCT TCGACGCCTG TTTCGTCGGC GTGCCGTTCG ATCTCGGCAC CTCGAACCGG
ACCGGCGCGC GCTTCGGACC GCGCCAGATC CGCAGTGAAT CCGTGCTGCT GCGCCCGTAC
AACATGGCGA CGCGCGCCGC GCCGTTCGAT TCGCTGCGCG TGGCCGACCT CGGCGACGTC
GCGATCAATC CGTACAACCT GCACGATTCC ATCAAGCGCA TCGAAACCGC GTACGACGAA
ATTCTTCAAC ACGATTGCAA GCCGATCACG CTGGGCGGCG ATCACACCAT CGCGCTGCCG
ATCCTGCGCG CGATTCATCG CAAGCACGGC AAGGTCGGCC TGATTCACGT CGACGCGCAC
GCCGACGTCA ACGACACCAT GATGGGCGAG AAGATCGCGC ACGGCACGCC GTTCCGCCGC
GCGGTGGAAG AGGGCTTGCT CGATTGCGAC CGTGTCGTGC AGATCGGTTT GCGCGGCACG
GGCTACGCAG CCGAAGACTT CGACTGGTGC CGCGATCAGG GTTTTGAAGT CGTGCAGGCC
GAGGCTTGCT GGAACCAGTC GCTCGTGCCG TTGATGGCGC GTATTCGCGA GCGCATGGGC
GACGGCCCGG TGTACATCAC GTTCGACATC GACGGGATCG ATCCGGCTTT TGCGCCGGGC
ACGGGCACGC CGGAAATCGC CGGCTTGACG GTGCCGCAGG CGTTGGAAAT CATTCGCGGC
TCGCGTGGTC TGAATATCGT CGGCTGCGAT CTGGTCGAGG TCGCGCCGCC TTACGATCCG
TTCGGCACGA CCGCGCTGCT CGGCGCGAAT CTCGCGTTCG AATTGCTGTG CGTGCTGCCG
GGTGTCGAGT ATCGGGCGTC CACGCGCTAA
|
|---|
| Protein sequence | MNTSSFISPE AGERPQPLSG NAMPRCGGIA TMMRLPNVGS AEGFDACFVG VPFDLGTSNR
TGARFGPRQI RSESVLLRPY NMATRAAPFD SLRVADLGDV AINPYNLHDS IKRIETAYDE
ILQHDCKPIT LGGDHTIALP ILRAIHRKHG KVGLIHVDAH ADVNDTMMGE KIAHGTPFRR
AVEEGLLDCD RVVQIGLRGT GYAAEDFDWC RDQGFEVVQA EACWNQSLVP LMARIRERMG
DGPVYITFDI DGIDPAFAPG TGTPEIAGLT VPQALEIIRG SRGLNIVGCD LVEVAPPYDP
FGTTALLGAN LAFELLCVLP GVEYRASTR
|
|---|
| |