| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1039 |
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| Symbol | lolA |
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| ID | 6282803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1172120 |
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| End bp | 1172854 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642620600 |
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| Product | outer-membrane lipoprotein carrier protein |
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| Protein accession | YP_001894682 |
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| Protein GI | 187923040 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
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| TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0236245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.725621 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCTAT TCGCGCAGAA GTACGCTCGA GAGAATGCTC AACCCGGCCG AATCGGCCAG
CTTGCCCGCA CCTTGGTGCG TGGGGTAGGC AGCGTGGCGA TCGGCGCGTC GGTGCTGTTC
GCGTCGCAGG CGTTCGCCAG CGGCACCGAG CAACTGAAGG CGTTCGTCGC GCAAGTGCAT
TCGGCGCGCG GCACCTTCGT CCAGCAGGAA GTGCGGGCGC CGAGCAAGGC GCAAGGCGCG
AGCGGCACGT TGTCGACCCA GGGGGCGGGC AAAACCGGCA CGTCGAGCGG CACCTTCACG
TTCGCGCGTC CCGGAAAGTT CATCTGGCAA TACGAGAAAC CGTATGCCCA GTTGCTGCAA
GCAGACGGCG ACAAGCTCTA CGTCTATGAC AAGGATCTGA ATCAGGTGAC GGTGCGCAGC
CTCGGCGGCG CACTCGGCGC GAGCCCGGCC GCGATCCTGT TTGGCAGCAA CGATCTCGAC
AAGAACTTCA CGCTGCGCGA CGCGGGTGTG AAAGCGGGCA TCGACTGGCT CGAACTTACG
CCGAAGGCGA AAGACACGCA GTTCCAGCGC GTGGGCATCG GCTTCAAGGA CGGCAATCTC
GAAGCGATGG AATTGCACGA CGTGTTCGGC AACGTGACGC TGCTGACCTT CTCGAACATT
CAGAAGAATC CGCCGCTGCC GGCCGATGCG TTCAAGTTCA CGGTGCCGAA GGGCGCGGAC
GTGATCAACG GATAA
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| Protein sequence | MQLFAQKYAR ENAQPGRIGQ LARTLVRGVG SVAIGASVLF ASQAFASGTE QLKAFVAQVH
SARGTFVQQE VRAPSKAQGA SGTLSTQGAG KTGTSSGTFT FARPGKFIWQ YEKPYAQLLQ
ADGDKLYVYD KDLNQVTVRS LGGALGASPA AILFGSNDLD KNFTLRDAGV KAGIDWLELT
PKAKDTQFQR VGIGFKDGNL EAMELHDVFG NVTLLTFSNI QKNPPLPADA FKFTVPKGAD
VING
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