| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1034 |
|---|
| Symbol | |
|---|
| ID | 6283498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1164949 |
|---|
| End bp | 1166457 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642620595 |
|---|
| Product | flagellar hook-associated 2 domain protein |
|---|
| Protein accession | YP_001894677 |
|---|
| Protein GI | 187923035 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1345] Flagellar capping protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.460836 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGCA TCACTTCCTC GGTGAATAGC GCGACGGCCA ACGCGCAAAG CCAGGTGCAG
CAAGCGGCGC AATCCATTAT CAGCGGTTCG ACCGGCAATT CGTCGATGGA TGTGGCGAGC
TTGGTCTCGG TGCTCGTCAA CGCCAAAACG GCGGGTCAGG CGGCGTCGTT GCAGGCCCGG
CAGACTAGCG ACAACACGAC ATTGTCCGCG TACGGCGCGC TCACTTCGGC GTTGTCCGCC
TTGCAGGCGG CGATTAAAAA TCTGTCGGAC GGCACCACCT TGTCCACCTT CGCGGCCACC
GCGAGCGGCA AGGGCCTCGA CCCGAAAGCG GGCCCCGGCG CGGTGGCCGG CAGCTATGCG
ATCGACGTGA CGCAGATCGC CTCGTCGCAG AGCCTGGCGT CGGCGGCGTT CGGCGCGACG
ACGAAACTCG GCACCGGCAC GTTGACGATC TCGGTCGGCG GCAAGCCGAT GGACGTCTCC
ATCGACAGCA CCAACAACAC GTTGAGCGGC ATCGCCAGCG CGATCAACAA GGCGTCCAAC
AATCCGGGCG TGACTGCGAC GATCGTGACC GGCACCGGCG GCGCTCACCT CGTGCTGCGC
TCGGCCACCA CCGGCTCGGG CAACACGATC AACGTGGCCA CCAGCAACGT ACAGAACGAC
GCGGGCCTGT CGAGCCTCGG CGTGACTTCG ACACCCGGCG CGAACGGCGG AGCGTCCACG
ATCGTGTCGT CGGATGCCGG CAATGCGTGG CGTCAGAGCG AAGTGGCGCA GGACGCGTTG
GTGACCATCG GCGGGATCGC GGCGCGCAGT GCCAACAATG CCGTGACCGA TGCGATTGAC
GGCGTCACGC TGAATCTGTC GGCCGCGTCG GTCGGCAGTC CGCAAACGCT GACGATCGCG
CCCGACACCA CCGCGCAGAA CACGGCCATC ACAAACTTCG CCAACCTGTA CAACACGGTG
GTCACCACGA TCGGCAAGTT GTCCTCGTAC GACAAATCGT CGAAGACGGG CGGTGCACTG
CTTGGAGACT CGACGCTGCT GACGGTGAAG AATGCGTTGG CGTCGATCAT CGCCGGCGGC
GTGGGTAAGG GCACTTCCGT AGTGAGCCTC GGGCACATCG GCATCACGCT GAAGGGCGAT
CCCGCGGACG GCACGCTGGT CGTCGACAAC GCCAAACTGA CGACAGCGCT CAATAGCAGC
CCAGCGCAAG TTTCCGCGCT GTTCAACTCG ACCGACGGCG TCGGCGCCAA ACTGAACAAG
AGCATCGACG AGTTCACGCG GACGGGCGGC ATCATCGACA CGCGCAACAA CGCGCTCAAC
GCCGACCTGA AAAGCGTCAC CGCGCAGCAG ACCAAGCTGA GCGACTACGC CACGCAATTG
ACGAAGCAGT ATCAGAGCCA ATTCACCGCG CTGAACACGT TGATGGCGAC CATGAACAAC
AACTCGGCCT ATCTGACGGC GCTATTCGGC GGCTCAAAGA GCGCGGGCGC GCTGGCGACC
AACAAGTAG
|
|---|
| Protein sequence | MSSITSSVNS ATANAQSQVQ QAAQSIISGS TGNSSMDVAS LVSVLVNAKT AGQAASLQAR
QTSDNTTLSA YGALTSALSA LQAAIKNLSD GTTLSTFAAT ASGKGLDPKA GPGAVAGSYA
IDVTQIASSQ SLASAAFGAT TKLGTGTLTI SVGGKPMDVS IDSTNNTLSG IASAINKASN
NPGVTATIVT GTGGAHLVLR SATTGSGNTI NVATSNVQND AGLSSLGVTS TPGANGGAST
IVSSDAGNAW RQSEVAQDAL VTIGGIAARS ANNAVTDAID GVTLNLSAAS VGSPQTLTIA
PDTTAQNTAI TNFANLYNTV VTTIGKLSSY DKSSKTGGAL LGDSTLLTVK NALASIIAGG
VGKGTSVVSL GHIGITLKGD PADGTLVVDN AKLTTALNSS PAQVSALFNS TDGVGAKLNK
SIDEFTRTGG IIDTRNNALN ADLKSVTAQQ TKLSDYATQL TKQYQSQFTA LNTLMATMNN
NSAYLTALFG GSKSAGALAT NK
|
|---|
| |