| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1030 |
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| Symbol | |
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| ID | 6284132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1160800 |
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| End bp | 1161657 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642620591 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001894673 |
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| Protein GI | 187923031 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0910759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.12069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCTA AGATGACGAT CAGCCGTGCC GTCATTTATG CGGCCTTGTT TCTGTTCGCC
CTGTATTTCC TGTTCCCGCT GTACGTGATG CTGTCCACGT CGTTCAAGGA CATCGATCAA
CTGCGCACGG GCAACCTGCT CACGCCGCCT ACCCACTGGA CCATCGATCC GTGGATCAAG
GCGTGGAGCG GCGCCTGCAC GGGCGTGCGT TGCGACGGTA TGCAGCCGTT CTTCATGAAC
TCGGTGCGGA TGGTGATTCC CGCCGTGCTG ATCTCGTCGA TCATCGGCGC GTTCAACGGC
TATGTGCTCA CGCACTGGCG GTTTCGTGGC GCGGATCCGA TCTTCACGAT GATCCTGGTC
GGCTGCTTCA TTCCGTTCCA GGCGATCCTG CTGCCGATGG CGCGCTTCGA AGGCTTCCTC
GGCCTGTCGA ACACGACCAC CGGCCTGGTG GTGGTGCACG TGATCTACGG TATCGCCTTC
ACCACGATGT TCTTCCGCAA CTTCTACGTC AGCATTCCGG CTGAACTCGT GAAGGCGGCG
CGTATCGACG GCGCGGGTTT CTTCACGATC TTCACGAAGA TTCTGCTGCC GGTCTCGCTG
CCGATTTTCA TGGTGTGCCT GATCTGGCAA TTCACGCAGA TCTGGAATGA CTTCCTGTTC
GGTATCGTGT TCTCCGGCGT CGATTCGATG CCGATCACGG TGGCGCTGAA CAACCTCGTG
AACACCTCGA CCGGCGTGAA GGAATACAAC GTGGACATGG CCGGCGCGAT CATCGCCGCG
TTGCCCACGC TGCTGGTGTA CATCATCGCC GGACGCTATT TCGTGCGCGG TCTGACGGCC
GGCGCAGTGA AGGGCTAA
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| Protein sequence | MQPKMTISRA VIYAALFLFA LYFLFPLYVM LSTSFKDIDQ LRTGNLLTPP THWTIDPWIK
AWSGACTGVR CDGMQPFFMN SVRMVIPAVL ISSIIGAFNG YVLTHWRFRG ADPIFTMILV
GCFIPFQAIL LPMARFEGFL GLSNTTTGLV VVHVIYGIAF TTMFFRNFYV SIPAELVKAA
RIDGAGFFTI FTKILLPVSL PIFMVCLIWQ FTQIWNDFLF GIVFSGVDSM PITVALNNLV
NTSTGVKEYN VDMAGAIIAA LPTLLVYIIA GRYFVRGLTA GAVKG
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