| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1024 |
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| Symbol | |
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| ID | 6284348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1151332 |
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| End bp | 1153005 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642620585 |
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| Product | type I phosphodiesterase/nucleotide pyrophosphatase |
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| Protein accession | YP_001894667 |
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| Protein GI | 187923025 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.414334 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGACGA TCAGGAGATG GCAGCGTGCG CAGAGCGTGA TCGCAGGTGG TGTCGCCATG
CTCGCCGCGC TGCATGCGGC AACGGCGCTG GCGGGTGACG CCGACGATCA CTCGCGCGAG
CACGAGGCAG TCAAGCATGT GCTGTTGATC AGCTTCGACG GGTTGCATGA GCAGGACGTC
GCGCGCTGCA TCGGTTCGAA TTCATGTCCG AATCTGGCAT TGCTGGCGAA GTCGGGTACG
AACTACACGA ACGCGCATAC GCCAGGCCTG TCCGATTCAT TTCCTGGTTT GGCTGCATTG
GTGACGGGCG GCTCGCCGAA GTCGGCCGGT CTGTTCTACG ACGTATCTTA TGACCGAACG
CTTTACGCCC CTTCCGATAC GGGCTGCACG GGCAAACAAG GCTGGAATGT CGTATTCGAC
GAAACAACCG GCGTCGATGG GGAAAATGGC GGCGCGCTGA CGCATCTCAA CGGCGGCGGC
GCTTTTAACC CGCAGGCTAT CCCTCACGCA CTGGTCAACG GCGTGTGCCA GCCGGTCTAT
CCGCACAACT ACATCAAGAC CAATACCGTC TTCGAAGTCA TCAAGGAAAA CAAACGGGAC
GCGCGCACCG CTTGGGCCGA TAAGCACGCG TGGGGCTACG ATTGGCTGAA CGGACCATCC
GGTATTGGTG TAGACGATCT ATCGCGCACG GAAATCAATT CGATCGATCC TGCAACTAAC
ACCAATTACA CCGACATCTA CACGCACACG GAAAAATTCG ACAACTTGCA TGTTCAGTCG
CTGATCGCCG AGATCGACGG CAGGGACTCC ACCGGACAGT CGCGCGCCGA TGTCCCCACG
CTGTTCGGCA CCAACTTCCA GACGCTGAGC GTTGCCCAGA AGGCCACGGT CGCGAAGGGC
GGCGGCTATC TGGATGCGAG TTTCACGCCG GGCCCGCAGG TCGCCGCCGC GATTGCCTAT
CTGGACGACG CGTTAGGCCG TATCGTTGCT GAACTCAAGC AGCGCGGGCT TTATTCGTCC
ACCGCGATCA TTGTCACGGC CAAGCATGGC CAGTCGCCGA CCGACCACTC GAAGCTGGTG
AAGAACGGCG ACACGCTCAC GAAACTGCTG GAAGCCAACA ATTATCTGGA CCCGAATGGC
AACTTCGGAC AGAACGCGAC CAAGAGCGGC AATCTGAACG ACGGCACTGG CCTCGTGGAT
ACCGGCATGG TTCAAACGGA CGACGTCGGG CTAATCTGGC TGCGTGACCA AAGTCAGTTG
CACGCGGTCG TCAAGACGCT GAAGAGCAAC CTCAGTTGCA ACGCTCCGGG CATCTGCGCC
GACGGTCCGC AGGCGTACAT TCTGTACGGA CCGCAACTTG CCGCGCGCTT CGGCAATCCG
GCGCGCGGCC GCACGCCCGA TATCATCGTG CAGCCGAATC CGGGTGTCAT CTATACGTCG
AGTACGTCGA AAGACGAAGA GCACGGCGGC AACGCGCCGG ACGACAGCCA TCTGGGTCTC
GTGGTTTCCG TGCCGGGTGC TCGTCGAACG GGACAAACCG TCGACGAACC GGTGCTGACC
ACTCAGGTCG CGCCGACTAT CCTGCGCCTG CTCGATCTCA GACCTGAACT GCTGCATTCG
GTTGCCATCG AAGGAACCCG TGCGCTGCCC GGCTTCGAGC GCAACCGCTT CTAG
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| Protein sequence | MKTIRRWQRA QSVIAGGVAM LAALHAATAL AGDADDHSRE HEAVKHVLLI SFDGLHEQDV
ARCIGSNSCP NLALLAKSGT NYTNAHTPGL SDSFPGLAAL VTGGSPKSAG LFYDVSYDRT
LYAPSDTGCT GKQGWNVVFD ETTGVDGENG GALTHLNGGG AFNPQAIPHA LVNGVCQPVY
PHNYIKTNTV FEVIKENKRD ARTAWADKHA WGYDWLNGPS GIGVDDLSRT EINSIDPATN
TNYTDIYTHT EKFDNLHVQS LIAEIDGRDS TGQSRADVPT LFGTNFQTLS VAQKATVAKG
GGYLDASFTP GPQVAAAIAY LDDALGRIVA ELKQRGLYSS TAIIVTAKHG QSPTDHSKLV
KNGDTLTKLL EANNYLDPNG NFGQNATKSG NLNDGTGLVD TGMVQTDDVG LIWLRDQSQL
HAVVKTLKSN LSCNAPGICA DGPQAYILYG PQLAARFGNP ARGRTPDIIV QPNPGVIYTS
STSKDEEHGG NAPDDSHLGL VVSVPGARRT GQTVDEPVLT TQVAPTILRL LDLRPELLHS
VAIEGTRALP GFERNRF
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