| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1014 |
|---|
| Symbol | |
|---|
| ID | 6284636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1135164 |
|---|
| End bp | 1139495 |
|---|
| Gene Length | 4332 bp |
|---|
| Protein Length | 1443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642620575 |
|---|
| Product | protein of unknown function DUF490 |
|---|
| Protein accession | YP_001894657 |
|---|
| Protein GI | 187923015 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.954334 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGG ACGTTTCCAC TCAACCTCCC GTGCAGCCTC CCGGCGCTAA TCCGCCAGGA
GAGCCGCCGG GACAGCAGCC GCCGCCCAGG CGCCGCCTCG GCTGGTTGCT GCTGAAAACG
GTCGCGTGGA TGGTGGCCGT ACTGACGTTG TTGCTCGCGT TGGCGGTGGG TTTGCTGTAC
GGCGCGCTGA CGACCGAGCG CGGCACCGCC TACGCGTGGC AGGCGGCGGT CAAGCTGCTG
GGCGGCAAGC TGAGCGGCAC GCTGGAGCGT GGCGCGCTCG TCCATGGCGT GGAATTGCGG
CAAGTACGCT GGCGCAGCCT CGACGGCAGC GGCACCGATA TTCAGATCGA CCGGGTGACG
GGCCGCTGGG CGCTCGCGCG CGAGCCGTGG CGCTTGACGA TCGACTATCT GCGTATCGGC
ACGGTGGACG CGCGCATTGG TTCTTCGTCG TCGAGCAGCA GCGGACCGGT GAAGCTGCCC
CAGGATTTGC GTTTGCCGAT GCAGCTCGAC GTCCGCGACG TCCAGGTCGA CAAGCTGCTG
CTGCATCAGG GTGCGTCGAC GACCGAATTC TCGCGCCTCG TCTTTCATGG TCGCAGCGAC
GGGCGCCATC ATGAAGCCGC CATCGAGCGG CTGGATACGC CGTTCGGCGC GGTGACGGCG
GCCGCCAAAC TCGACGGTGT GCGGCCGTTT CCGCTGAGCG GGGACATCGG CTATTCAGGG
AAGGTGAACG ACGAAGCGGT GCAGGTGGGC GGCCATCTGA GCGGCTCGTT GGAGAACCTC
ATCGCCGAAC TCGATGCTAG CGGCATGAAG CTCACCGGTC ACGCGCGGGT CGAGGCTACG
CCGTTCGGCG ACGTGCCGCT GCAGCGCGCC ACGCTGACTT TCGATCACAT CAATCCGCAG
GCTTTCGCGC CCGGTGCGCC GATGGCCGAT CTGGCGGTGC GGGCGGAATT GCAACCGGTG
GGGCGGGGTG CGGCGGGAGA GGTTGTGTTG GGCGCGACCG GCGCCGCCAG CCAGAGCGCC
CTCACGAGCG CAAGCGCAAG CAAATCCGCC GGCACGACAC AACCGCCCGC CGCCACAAAC
GGAAAAAGCA CCAGCCAACC CGCCGCAACT TTCGCGGTCA CCGGCCACGT CTCGATCGTC
AACGCCAAAC CCGGCGCGAT CGACCAAAAC CTGCTGCCGC TAATCGACGC CAACGCGGAC
GTGCGGCTCG ATGCCCAGGC GCAGCGCATC TCGAATCTTG TCGTGCGGCT CGTGAAAAAC
GCCACGCTCA CCGGCGGCGG TACGCTATCC GGCAAGCGCG GACAGTTCGA TCTCCAGGTC
GCCAACCTCG ACCTGAACGC GCTGCAAGCG ACGGTGCGGC CCACGCAATT GTCCGGCCCC
ATCGGCGTGC GCCTGAACGA CGACGTGCAG AGCCTCACAC TCGACCTCGC CGACCCGAAA
GCGGCGCTGC GCGCTCAGGG CAAGGTGACG TTCGATCCCG CCCGCACGAG CTTCAACGAC
GTGCGCATCA CGTCGGGCAA AGGCCGCATC GATCTGTCCG GCGCGCTCAA GCACGACGCG
AATTCCACCT ACAACCTGAA AGCGCAACTG ACCGATTTCG ACCCGTTGAC GCTGACTTCG
CAGATGCCGT CGCGCAAGCC GGTAGCCGAA GCGGCGCCGG CGGCAAGCCG TGAAAAAAAC
AGCAAAACTG CACAGGCCGC AGCCGCGCAA GCGGGCAGCA CGGCCGGGGC AAAGTCCGCC
GCGCCCGCGG AAAAAGCCGC CGCCGCCGTG AAAAACACGG CCAAAGCCGC TGTCAAAACC
GAAGTGGTCG AACGCAAAAC GCCGCCGCCG AAGAAACGCG GTGCCCCGCC TGCCCGCAAA
ATCGAGGCGC GCGTGACCGG CACGCTCACC GCCGCCGGCA TGCTCGGCCC GGTCTTCACG
ACCAAGGCCG AATTCAAGCT CGGGCCGAGC GTCTACGACG GCCTGCCGTT GACCGGCGGC
GGCACCATCC AGTTGGCAGG CTCGCGGATT CTGCCGAGCC GCGCGAACCT CTCGGTCGCG
GGCAACCAGG TGGATTTGCA AGGTAGCTTC GGCGCGCGGG GCGACCGGCT GAAGTTCCGC
GTCGACGCGC CAGCGCTGGA GCGCCTCGGT TTCGGTCTCG CAGGACTCAT CGCGGCCGAT
GGCGACGTCA CCGGCTCGTT CGCGCATCCG AACGTCGTGC TGAATTACAA GGCCGACAGC
GTGGTGTTCA GCAGCAACCG TATCGGCCAT GCGGAAGGGC ACGCCGAATT GCGCGACGGC
GCGAACGGCG CGCTCGTCTT CACCACCGAC GCGCGCAATC TCAGCGCGGG CGGCGTCGAT
CTGACCACGC TCACCGCGCA TCTGTCCGGC ACGCGCGGCA ATCACACGCT CGAGGCCGCG
GCCACCGGCA AGCTGCAGGA CCGTCCGCTC GATCTCACGC TCGCCGCCAA CGGCAAGCTG
ACCGAAGCGC GCGACGGCAC GCGCTGGGAC GGCACCGTCA CGCGGTTGCA GAATCGCGGC
ACGCCGGCGT TGAATCTCGA ATCGCCGCTC GCCGTCAGCG CCGGGCCGGA CCGCCTGACG
CTCGGCGCGA CCCGCCTCAC GCTCGAAGGC GCGGTGTTGA GCCTGAAATC TTTTGTTTTC
GATCACGGCA AGATTCAGTC GGCGGGCAGT CTGACCGGCA TCTCGGTCGC GCGTCTGCAG
GACCTGCGGC GCGAGATCAC GGGCGAGCCG CCGCACGTCA AAACCGATCT GGTGTTCGAC
GGCGACTGGG ACTTCGCGCT CGGCAGCACC GCGACCGGCC ACATCCAGTT GCAGCGCCGC
AGCGGCGACG TCACGGTTGA AATCGGCCGG GGGCTTGCGT CGCTCGGTAT TTCGAGCATC
GCGGCGCGCG CCGAATTCAG CGGCGGCAAC CGGCTCAATG CCACCTTGCA CGCGCAGGCG
AGCCGCATCG GTGTGATCGA CGCCGATGCG CACACCACGC TGGTCATGCG CGACGGCTTT
CTGACCGTCA GCGAAGACGG CGCGCTCACC GGCAATGTGA ACGCCAACGT GCCGTCACTG
AAAACGACCG GCGGCCTGTT CGGCCCGAGC TATCTGCTCG ACGGCCACCT CGCGCTCAAG
CTCGCGCTCG GCGGCACCGT CGCCAAGCCG AACCTGACCG GCTCGCTGCT CGGCGACGGC
CTGTCCGCGA CCATGGTCGA TCAGGGCGTG CAGTTGAAGG ACGGCGTAGT GCGTATCGCG
CTTTCACACA ATCTGGTGGA CTTCCAGCAG GTCGAATTTC ACGGCGCAAG CGGCACCTTG
CGCGCGACCG GCCGCGTACG TCTGGACGGC GATCAACCGG ATCTGACCGC GAGCATCGTC
GCGGACAAGC TCGAACTGTT CGCGGCGCCG GATCGCAACC TGTCGCTGTC GGGCAGCGCG
AGCGTCGCGA ATGCCGGTGC GCAGGGCGGC ATGGCGATCA ACGGCAAATT CGTGGTCGAT
CACGCGTTGT TCGACATGCC GGAGCAGGCC GCGCCTAAGC TCGGCGACGA CGTGGTGGTG
GTGCGCCCGG ACGGTTCGGT GGCGGGCGAG CGTCCGCGGC CCGTGCCGGG CACCAACAAG
CCGATCGGTC CGTTCGCGCC GCGCGCCAAT ATCGACATCA GCCTCGGCAA CAACTTCCGT
TTCCGCGGCC AGGGCGCCGA CCTCGGCCTG ACCGGCACGA TCACCGCGAT GAGCGCGCCG
AATCTGCCGC TGCGCGCGGT GGGCAACGTG CGCGTCACGC CGGGCTCGAC CTACACGGCG
TTCGGCCGCA AGCTCAACAT CGAGAACGGC TTCTTCACGT TCAACGGGCC GGTGGCCAAT
CCCGGCATCA ATATCCTGGC CATGCGTCGC AATCAGCAGG TCGAGGCGGG CGTGCAGGTC
ACGGGCACGG TCCAATTCCC GACGGCGAAG CTGGTGTCCG AGCCGAACGT GCCGGACAAC
GAAAAACTCT CGTGGCTGCT GTTCGGCCAC GGCACGGATC AGGGTAACAA CCTCGGTCAG
CAAAGCACCA TGACGACGGC GCTGGCGCTG CTCGGCAGCG CGAGCGGCAA GCGGATCGCG
CAGACGTTCG GGCTCGACGA GTTTTCGGTC GGACAGAGCG AAGTCGGCTT GACCGATCCG
CAAGTGGTGA TGGTGTCGAA GGCGATCAAT GAGTGGCTCG TGATCGGCTA CGAACAGGGG
CTGCAGTCGG CGAGCAATGC GATCAAGGCG ACGGTCAACC TGACGCGGTA TTGGTCGGTC
GGGGCTTACG GCGGCACGTT CACCGGCGTC GAACTGTTTT ACACGCGGCG CTTCGACCGG
ATTCGGTGGT GA
|
|---|
| Protein sequence | MTTDVSTQPP VQPPGANPPG EPPGQQPPPR RRLGWLLLKT VAWMVAVLTL LLALAVGLLY
GALTTERGTA YAWQAAVKLL GGKLSGTLER GALVHGVELR QVRWRSLDGS GTDIQIDRVT
GRWALAREPW RLTIDYLRIG TVDARIGSSS SSSSGPVKLP QDLRLPMQLD VRDVQVDKLL
LHQGASTTEF SRLVFHGRSD GRHHEAAIER LDTPFGAVTA AAKLDGVRPF PLSGDIGYSG
KVNDEAVQVG GHLSGSLENL IAELDASGMK LTGHARVEAT PFGDVPLQRA TLTFDHINPQ
AFAPGAPMAD LAVRAELQPV GRGAAGEVVL GATGAASQSA LTSASASKSA GTTQPPAATN
GKSTSQPAAT FAVTGHVSIV NAKPGAIDQN LLPLIDANAD VRLDAQAQRI SNLVVRLVKN
ATLTGGGTLS GKRGQFDLQV ANLDLNALQA TVRPTQLSGP IGVRLNDDVQ SLTLDLADPK
AALRAQGKVT FDPARTSFND VRITSGKGRI DLSGALKHDA NSTYNLKAQL TDFDPLTLTS
QMPSRKPVAE AAPAASREKN SKTAQAAAAQ AGSTAGAKSA APAEKAAAAV KNTAKAAVKT
EVVERKTPPP KKRGAPPARK IEARVTGTLT AAGMLGPVFT TKAEFKLGPS VYDGLPLTGG
GTIQLAGSRI LPSRANLSVA GNQVDLQGSF GARGDRLKFR VDAPALERLG FGLAGLIAAD
GDVTGSFAHP NVVLNYKADS VVFSSNRIGH AEGHAELRDG ANGALVFTTD ARNLSAGGVD
LTTLTAHLSG TRGNHTLEAA ATGKLQDRPL DLTLAANGKL TEARDGTRWD GTVTRLQNRG
TPALNLESPL AVSAGPDRLT LGATRLTLEG AVLSLKSFVF DHGKIQSAGS LTGISVARLQ
DLRREITGEP PHVKTDLVFD GDWDFALGST ATGHIQLQRR SGDVTVEIGR GLASLGISSI
AARAEFSGGN RLNATLHAQA SRIGVIDADA HTTLVMRDGF LTVSEDGALT GNVNANVPSL
KTTGGLFGPS YLLDGHLALK LALGGTVAKP NLTGSLLGDG LSATMVDQGV QLKDGVVRIA
LSHNLVDFQQ VEFHGASGTL RATGRVRLDG DQPDLTASIV ADKLELFAAP DRNLSLSGSA
SVANAGAQGG MAINGKFVVD HALFDMPEQA APKLGDDVVV VRPDGSVAGE RPRPVPGTNK
PIGPFAPRAN IDISLGNNFR FRGQGADLGL TGTITAMSAP NLPLRAVGNV RVTPGSTYTA
FGRKLNIENG FFTFNGPVAN PGINILAMRR NQQVEAGVQV TGTVQFPTAK LVSEPNVPDN
EKLSWLLFGH GTDQGNNLGQ QSTMTTALAL LGSASGKRIA QTFGLDEFSV GQSEVGLTDP
QVVMVSKAIN EWLVIGYEQG LQSASNAIKA TVNLTRYWSV GAYGGTFTGV ELFYTRRFDR
IRW
|
|---|
| |