| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1013 |
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| Symbol | |
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| ID | 6284635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1133300 |
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| End bp | 1135135 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642620574 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_001894656 |
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| Protein GI | 187923014 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.527931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGGGGT GTGCGATCGA CAAGCCGCGG CTGCGGCGCG GCAAGGCCGG TTCCGGGCGT
GGGCAGCGCA CGGCCATACG GCATTGGTTG CGCACGTGGC TGGCATTCGG CCTCGTCATG
CTGACGCTGG CAACCGGCAA CGCCCATGCC GCGAAAGCGG CGGCCAGCTA CAAGGTCGAC
ATCGAAGCCA CGCCGCGCTC GCTGCGCAAG CTGCTGGAAG CGCATCTGGA TATCGCGCGT
TTCGCCAAGC GCCCCGACAT CAGCGACGAC CAGTTCGAGT TTCTGATCAC CGCCACGCCC
CAGCAAGTGC GAGATCTGGC CTCCACGCAG GGCTATTTCA CGCCGGTCGT GCGCACCGAC
GTGCGTACCG TCGACAATGC AAAGCGCGTC ACGGTGAGCG TCGATCCCGG TCCGCAGACC
GTCATCTCAT CGGTTTCGCT GTCGTTTCGC GGGCCGGTGC TGACCGAAGA TCCCGAGCAG
GAAAACACCG CGCGCTTCGC ATTTTCGCTG CACGAAGGCG AACCGTTCTC GCAGGGCGGT
TGGGACGATG CGAAGAACGC GTCGCTCAAG GCCTTGCAGG CGCGCCGCTA TCTGGGCGCG
AAGATCTACC ACTCGGAGGC GCGGGTCGAT CCGCGCACGC ACGAGGCGAA ATTGTCGGTC
ACGTACGACA GCGGACCGAC CTTCACGATG GGCAAGCTCG ACGTATCGGG CACGCGGCGC
TATCCGGAAC AGATCGTCGA CAACGTGAAT CCGATTTCGG TGGGCGAAAT CTACGACGTT
CAGCGCATCA CGGAATTGCA GCGGCAATTG CAGAACACGC CGTACTACGC GAGCGTTGCG
ATCGACGTGG GCGACGATCC GGCCAAGCCG GTCGACACGC CGGTCCACGT GAAGGTGTCG
GAATATCCGT ACAACAGCAT TCGAGGCGGG GTGGGCTACT CGACGGACAA CGGTCCGCTG
GTTCAGGGTT CCTATTCGTA TCTGGACACC TTCGGCAAAG CGTGGCCGTT CACCATTCAG
GGGCGCGTCG ACCAGATCCA GCAATACGGG CAAATCCAGC TCGCCATGCC GCCGGGGCCG
CGTGCGTGGA CCAATAGCAT GCTGGCGTCC TACACCACGA CCGACGTATC CGACACGCGT
ATTTACAGTA TCCGCGGCGG TGTGCAACGG GCCCGGACCT CGCAATTCAT CGACTACAAC
TACGCGCTCC TGTACTACCA GGACCGGCTC GATCAGAACG CGGTCGCGCC GACCACGAGC
CGCGCGCTGG TGCCGTCCTG GTCGTGGACC CGGCGCAATA CCGACGACCC GTTGTTCCCG
CGCAGCGGCA ACCTGATTCA CGTCGAGGCG GGTTTCGCGG TCAAAGGCGT GCTGACCGAC
CAGACCTTCA TTCGCGGTTA CGCGCGCGGT CAGCAGTATC TGCCGATCGG CAAGGAAGAC
CTCGTGCTGA TTCGCGCCGA ACTCGGCGGC GTGTTCACGA GCGGCCCTTC GAGCGGCATT
CCGGCGTCGC TGCTGTTTCG CGCCGGCGGC TCGAATTCGG TGCGCGGCTA TGGCTACCAG
AGTATCGGTA ATAGCGTCGA TGGTTCGGTG CTGCCCACCA AGTATCTCGT CACGGGCTCT
GCCGAGTACC AGCATTGGTT CAGTCACGAC TGGGGCGCGG CCGCGTTCTT CGACATCGGC
ACCGCCACGG ACACCTGGGG CGAAAAAGTC TTCTATCCCG GCGTCGGCAT CGGGGCGCGC
TGGCGCAGCC CGGTCGGCCC GGTCAACGTC GATGTCGCCT ACGGCATTCG CAACAAGAGC
GTGCGGCCGT ATCTGACGCT GGGCATCGCC TTCTGA
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| Protein sequence | MAGCAIDKPR LRRGKAGSGR GQRTAIRHWL RTWLAFGLVM LTLATGNAHA AKAAASYKVD
IEATPRSLRK LLEAHLDIAR FAKRPDISDD QFEFLITATP QQVRDLASTQ GYFTPVVRTD
VRTVDNAKRV TVSVDPGPQT VISSVSLSFR GPVLTEDPEQ ENTARFAFSL HEGEPFSQGG
WDDAKNASLK ALQARRYLGA KIYHSEARVD PRTHEAKLSV TYDSGPTFTM GKLDVSGTRR
YPEQIVDNVN PISVGEIYDV QRITELQRQL QNTPYYASVA IDVGDDPAKP VDTPVHVKVS
EYPYNSIRGG VGYSTDNGPL VQGSYSYLDT FGKAWPFTIQ GRVDQIQQYG QIQLAMPPGP
RAWTNSMLAS YTTTDVSDTR IYSIRGGVQR ARTSQFIDYN YALLYYQDRL DQNAVAPTTS
RALVPSWSWT RRNTDDPLFP RSGNLIHVEA GFAVKGVLTD QTFIRGYARG QQYLPIGKED
LVLIRAELGG VFTSGPSSGI PASLLFRAGG SNSVRGYGYQ SIGNSVDGSV LPTKYLVTGS
AEYQHWFSHD WGAAAFFDIG TATDTWGEKV FYPGVGIGAR WRSPVGPVNV DVAYGIRNKS
VRPYLTLGIA F
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