Gene Bphyt_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1005 
Symbol 
ID6284505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1126755 
End bp1128215 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content66% 
IMG OID642620566 
Productcobyric acid synthase 
Protein accessionYP_001894648 
Protein GI187923006 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1492] Cobyric acid synthase 
TIGRFAM ID[TIGR00313] cobyric acid synthase CobQ 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCAGG GCACCACCTC CGATGCCGGT AAGAGCACGC TCGTCGCCGG TCTGTGCCGG 
CTCGCTCGCC GCGCCGGCGT GCGGGTCGCG CCGTTCAAGC CGCAGAACAT GGCGCTCAAC
AGCGCGGTGA CCGTGGACGG CGGCGAGATC GGCCGCGCTC AGGCTTTGCA GGCGATCGCC
GCGGGTATTG CCGCGCACAC GGATCTGAAC CCGGTGCTGC TCAAACCGAC CAGCGACCGT
GGCGCGCAAG TGATCATCCA CGGCAAGGCG CGCATGAATC TCGACGCGCG GGCGTATCAC
GACTACAAAC CCGTCGCGTT CGAAGCGGTG CTTGAATCGT ATGCGCGTCT GCAGGCGGCG
TACGAGACGA TTTTCGTTGA AGGCGCGGGC AGTCCGGCGG AAATCAATCT GCGTGATCGC
GACATCGCCA ACATGGGTTT CGCGGAAGCA GTCGATTGCC CGGTCGTGCT GGTCGCCGAT
ATCGACCGGG GCGGCGTGTT CGCCCATCTC ACGGGCACGC TCGCGTGCCT GTCGGCGAGC
GAGCAGTCGC GGGTGCGCGG GTTCATCATC AACCGTTTTC GCGGCGATGT CAGTTTGCTC
AAGCCGGGCT TGGATTGGCT CGAAGCGAAA ACCGGTAAGC CGGTGCTCGG CGTCGTGCCC
TATCTGCACG GTCTGACGCT CGACGCCGAA GACATGCTGC CGCCCGAATT GCGCGCGGCG
CACGACGGCG GCGCGGCGCG CATGCTGCGA GTGGTCGTGC CGGTACTGCC GCACATCAGC
AATCACACGG ATTTCGATGC GCTGCGCGCG CATCCGCAGG TCGATTTTGA ATACGTGCGC
AGCGGTACGC CGGTGCCGCC GGCTGATCTG ATCATTCTGC CAGGCTCGAA AAACGTGCCC
GGCGACCTGG CGTCTTTGCG CGCGCAAGGT TGGGACGCGG TGCTGCAAAA GCATTTGCGT
TACGGCGGCC GCGTGATCGG CATTTGCGGC GGCATGCAGA TGCTTGGGCG TGAAGTGGCC
GATCCGCATG GTGTCGAGGG TGCTCCTGGG ACGTCGGCGG GACTCGGCTG GCTCGACTAC
TCGACGGTGC TCACGCGCGA CAAGACGCTC AAGAATGTCA CCGGACACCT CGCATTGCCG
GGCTCGCCCG AAGTGGCCGG CTACGAAATC CATATGGGCG AGACGCACGG CCCGGCGCTC
GACACGCCCG CGTTGCGCCT GGGCGATGCG CAGGCAGCGC ATCCCGACGG CGCGATTTCC
GCCGATGGCC AGATTCTCGC GACTTACGTC CACGGGTTGT TCGACACGCC GGCGGCATGC
GCCGCGCTGC TCGCATGGGC GGGTTTGAGC GATGCGGAGG AAATCGACTA TCCGGCGTTG
CGCGAGGCGT CGCTGGAACG GCTCGCGGAT ACGCTCGCGG AGCATCTCGA TCTGCCGAAA
TTGTTCGCGG CGATTGGGTG A
 
Protein sequence
MIQGTTSDAG KSTLVAGLCR LARRAGVRVA PFKPQNMALN SAVTVDGGEI GRAQALQAIA 
AGIAAHTDLN PVLLKPTSDR GAQVIIHGKA RMNLDARAYH DYKPVAFEAV LESYARLQAA
YETIFVEGAG SPAEINLRDR DIANMGFAEA VDCPVVLVAD IDRGGVFAHL TGTLACLSAS
EQSRVRGFII NRFRGDVSLL KPGLDWLEAK TGKPVLGVVP YLHGLTLDAE DMLPPELRAA
HDGGAARMLR VVVPVLPHIS NHTDFDALRA HPQVDFEYVR SGTPVPPADL IILPGSKNVP
GDLASLRAQG WDAVLQKHLR YGGRVIGICG GMQMLGREVA DPHGVEGAPG TSAGLGWLDY
STVLTRDKTL KNVTGHLALP GSPEVAGYEI HMGETHGPAL DTPALRLGDA QAAHPDGAIS
ADGQILATYV HGLFDTPAAC AALLAWAGLS DAEEIDYPAL REASLERLAD TLAEHLDLPK
LFAAIG