| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1003 |
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| Symbol | cobD |
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| ID | 6284503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1124972 |
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| End bp | 1125907 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642620564 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_001894646 |
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| Protein GI | 187923004 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTCGC TCCCGCTTCT CGTGACGCTG GCCACTGCGG GCGTCGCCGT CGACCGCTGG
TTCGGCGAGC CGCGCGCGGC GCATCCGCTA GTGGGCTTCG GCAACTGGGC GAAGCGTCTC
GAAACACGCT ACAACACCGG CCGGCGCTTG CGGCTCAAAG GTCTGCTGGC GTGGTCGCTG
GCGGTCATGC CGCCGGTGCT GATCGCGTGG TGTCTGGTCG CCGTGCTGCC GTTTTACGCG
GCCTGCGTGG TGCATGTGCT GTTGCTGTGG TTCGCGCTCG GCGCGCGCAG TCTGCACGAG
CACATCGCGC CGATCGCGCA GGCTCTGGTG CAACGTGATC TCGCACAGGC GCGCTTGCTG
ACCGCGCGCA TCGTCTCGCG CGAAACCGCG GATGCCGACG AAGGCGCGTT ATCGCGCGCC
GCCGTCGAAT CGGCGCTCGA AAACGGCAAC GACGCGATCT TCGGCGCGCT GTTCTGGTTC
GCTGTCGCGG GCGGTCCGGG CGCGCTCGCC TTCCGCCTCG CCAACACACT GGACGCGATG
TGGGGTTATC GCACGCCGCG CTATTTGCGC TACGGCTGGG CCGCCGCGCG TATCGACGAC
GTGCTCAACT GGATTCCCGC GCGCCTGACC GCCGCCAGCT ACGCGCTGCT CGGCGACACG
CGCACCGCGT GGCGCTGCTG GCGCGAGCAG GCGCCAAGGT GGGACAGCCC GAACGCCGGG
CCGGTGATGG CTTCCGGCGC GGGCAGTCTG AACGTGCTGA TCGGCGGCCC GGCGGTGTAT
CACGGCGCGC TGGAACACCG GCCAACACTC GGCTTCGGCC ATACCGCGAA AGCCAGCCAC
GTGAGCGCCG CATTGATGCT GGTCGAGCGT ACCGTCATTC TGTGGCTCGC GGTGCTGATC
GTGCTGGCGT TGTTGAGCGT GCCTTTTCAT GGTTGA
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| Protein sequence | MLSLPLLVTL ATAGVAVDRW FGEPRAAHPL VGFGNWAKRL ETRYNTGRRL RLKGLLAWSL
AVMPPVLIAW CLVAVLPFYA ACVVHVLLLW FALGARSLHE HIAPIAQALV QRDLAQARLL
TARIVSRETA DADEGALSRA AVESALENGN DAIFGALFWF AVAGGPGALA FRLANTLDAM
WGYRTPRYLR YGWAAARIDD VLNWIPARLT AASYALLGDT RTAWRCWREQ APRWDSPNAG
PVMASGAGSL NVLIGGPAVY HGALEHRPTL GFGHTAKASH VSAALMLVER TVILWLAVLI
VLALLSVPFH G
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