Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1001 |
Symbol | |
ID | 6282274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 1122940 |
End bp | 1123842 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642620562 |
Product | periplasmic binding protein |
Protein accession | YP_001894644 |
Protein GI | 187923002 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGAC TCGCCCTCGC CTTCGCACTC TTCATCACCG CACATCACGC TCACGCCGCC ATCTCCGTGA CCGACGACAC CGGCGCAACC GTCACGTTGC CCGCGCCCGC GCAACGTGTG ATCAGCCTCG CGCCGCACGT CACCGAATTG CTGTATGCCG CGGGCGGCGG CGCGAAAGTG GTCGGCGCCG TTTCGTACAG CGACTATCCG CCCGAAGCGA AACAGTTGCC GCGCGTCGGC GACAACAAGG CGCTCGATCT CGAGCGCATC GTCGCGCTCA AACCCGATCT GATCGTGGTG TGGCGGCATG GCAATGCGCA GCGTCAGCTC GATCGCCTGC GCGAGATGCA CATTCCGCTG TTCTTCAGCG AGCCGCATCA TCTCGACGAC GTCGCCGTGT CGCTGACGAA GCTCGGACAA TTGCTCGGCA CGTCATCGAC GGCAGATGCG GCGGCCGCCG CCTATCGTCA GGACATCGCG AAGCTGCGCA ACCAGTATGC GAGCCGGCCG CCCGTCAGCG TGTTCTATCA GGTGTGGGAT CAACCGTTGA TGACGCTCAA CGGCGAGCAC ATGGTCAGCG ACGTGATCGC TCTATGCGGT GGCCGCAACG TGTTCGCCAA ACTCGAGCCG CTGGTGCCGA CGGTTTCGAC CGAAGCGGTG CTCGCCGCGA ATCCGGAAGC GATCGTCACC GCAGCGCCGG GCGCGACCAA ACCGGACACC ACCTTGCCGC AACTCGGCGC ATGGCGTTCA TGGCCGAGCC TGACCGCCGT AGCGAACAAC AATCTCTTTG CTATCGACGG CGATCTGATC AACCGCCCGG CGCCACGCAT CGCGCAAGGC GCGAAGCAAA TGTGCGAGGA CCTCGAAGCG GCGCGCTCAC GCAGGAAGTC TGGCGCGCAG TAA
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Protein sequence | MNRLALAFAL FITAHHAHAA ISVTDDTGAT VTLPAPAQRV ISLAPHVTEL LYAAGGGAKV VGAVSYSDYP PEAKQLPRVG DNKALDLERI VALKPDLIVV WRHGNAQRQL DRLREMHIPL FFSEPHHLDD VAVSLTKLGQ LLGTSSTADA AAAAYRQDIA KLRNQYASRP PVSVFYQVWD QPLMTLNGEH MVSDVIALCG GRNVFAKLEP LVPTVSTEAV LAANPEAIVT AAPGATKPDT TLPQLGAWRS WPSLTAVANN NLFAIDGDLI NRPAPRIAQG AKQMCEDLEA ARSRRKSGAQ
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