Gene Bphyt_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1001 
Symbol 
ID6282274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1122940 
End bp1123842 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content65% 
IMG OID642620562 
Productperiplasmic binding protein 
Protein accessionYP_001894644 
Protein GI187923002 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGAC TCGCCCTCGC CTTCGCACTC TTCATCACCG CACATCACGC TCACGCCGCC 
ATCTCCGTGA CCGACGACAC CGGCGCAACC GTCACGTTGC CCGCGCCCGC GCAACGTGTG
ATCAGCCTCG CGCCGCACGT CACCGAATTG CTGTATGCCG CGGGCGGCGG CGCGAAAGTG
GTCGGCGCCG TTTCGTACAG CGACTATCCG CCCGAAGCGA AACAGTTGCC GCGCGTCGGC
GACAACAAGG CGCTCGATCT CGAGCGCATC GTCGCGCTCA AACCCGATCT GATCGTGGTG
TGGCGGCATG GCAATGCGCA GCGTCAGCTC GATCGCCTGC GCGAGATGCA CATTCCGCTG
TTCTTCAGCG AGCCGCATCA TCTCGACGAC GTCGCCGTGT CGCTGACGAA GCTCGGACAA
TTGCTCGGCA CGTCATCGAC GGCAGATGCG GCGGCCGCCG CCTATCGTCA GGACATCGCG
AAGCTGCGCA ACCAGTATGC GAGCCGGCCG CCCGTCAGCG TGTTCTATCA GGTGTGGGAT
CAACCGTTGA TGACGCTCAA CGGCGAGCAC ATGGTCAGCG ACGTGATCGC TCTATGCGGT
GGCCGCAACG TGTTCGCCAA ACTCGAGCCG CTGGTGCCGA CGGTTTCGAC CGAAGCGGTG
CTCGCCGCGA ATCCGGAAGC GATCGTCACC GCAGCGCCGG GCGCGACCAA ACCGGACACC
ACCTTGCCGC AACTCGGCGC ATGGCGTTCA TGGCCGAGCC TGACCGCCGT AGCGAACAAC
AATCTCTTTG CTATCGACGG CGATCTGATC AACCGCCCGG CGCCACGCAT CGCGCAAGGC
GCGAAGCAAA TGTGCGAGGA CCTCGAAGCG GCGCGCTCAC GCAGGAAGTC TGGCGCGCAG
TAA
 
Protein sequence
MNRLALAFAL FITAHHAHAA ISVTDDTGAT VTLPAPAQRV ISLAPHVTEL LYAAGGGAKV 
VGAVSYSDYP PEAKQLPRVG DNKALDLERI VALKPDLIVV WRHGNAQRQL DRLREMHIPL
FFSEPHHLDD VAVSLTKLGQ LLGTSSTADA AAAAYRQDIA KLRNQYASRP PVSVFYQVWD
QPLMTLNGEH MVSDVIALCG GRNVFAKLEP LVPTVSTEAV LAANPEAIVT AAPGATKPDT
TLPQLGAWRS WPSLTAVANN NLFAIDGDLI NRPAPRIAQG AKQMCEDLEA ARSRRKSGAQ