| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0998 |
|---|
| Symbol | cobT |
|---|
| ID | 6282271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1120455 |
|---|
| End bp | 1121516 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642620559 |
|---|
| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
|---|
| Protein accession | YP_001894641 |
|---|
| Protein GI | 187922999 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCAT TGCCACGCTT GCCCGGATTG CCCGAAGTCG AACCGCTCGA TCAAACGCTG
CGTGACGAGT TGCAGCACAT CATCGATACC AAGACGAAGC CGCCGGGCAG TCTCGGCCGG
CTTGAAACGC TCGCGCGTCA GATGGGCTTG ATTCAGCGCA CCACGCATCC CACCGTGACG
CGCCCGGCGA TGATCGTGTT CGCCGGCGAC CACGGCGTCG CCGAGGAGGG CGTGAGTCCT
TATCCGCAAG CGGTGACCGC GCAGATGGTC GCCAACTTTC TCGCGGGCGG CGCGGCAATC
AATGCGTTGA GCCGCGTCTC GGGCATCGAG CTCGAAGTCG TGAATGCGGG CATTGCGACG
CCGTTGCCAT CCACCGCGGG CCTTATCGAC ATTCCGATTG CGGCCGGCAC CCGCAACTTC
GCGCGCGAAC CGGCTATGAG CCGCGACCAG GCGATCGCCG CGATGCAGGC GGGCGCGGCG
CGCGTGCGGC ATCACGCGGC GCTCGGCACC AATGTGATCG GCTTCGGCGA GATGGGCATT
GCGAACACTT CGGCGGCCGC GTGTCTGATG AGCCGCTTGT GCGGCGTGCC GATCGACGAA
TGCGTCGGCC GCGGCACGGG CCTCGACAAC GCGGGGCTCG CGAAGAAGCG CAATGTGCTG
GCGTCGGCGC TCGCGCGTCA CCCCGTATCC AGCGATCCGC TCGACGTGCT CGCCACCTTC
GGCGGCTTCG AGATCGCGAT GATGGCGGGC GCGTATCTCG CGGCCGCCGA GGCGCGCATG
ACGATTCTGG TCGACGGCTT CATCGGCACT TCGGCCTTGC TGATTGCCGA CGCCTTTGCG
CCGAGCATGC GTGAGTACTG CGTGTTCGCG CATGCGTCGA ACGAAGCGGG GCATCGGCGC
ATGCTCGATC ATTTCGGCGC GCTGCCATTG CTGTCGCTCG ACATGCGTCT CGGCGAAGGC
ACAGGCGCGG CGCTCGCGGT GCCGCTGTTG CGCGCGGCAA CGGCGTTCAT CAACGAAATG
GCGAGCTTCG AATCGGCCGG CGTGACGAAT CGCGATGCGT GA
|
|---|
| Protein sequence | MTSLPRLPGL PEVEPLDQTL RDELQHIIDT KTKPPGSLGR LETLARQMGL IQRTTHPTVT
RPAMIVFAGD HGVAEEGVSP YPQAVTAQMV ANFLAGGAAI NALSRVSGIE LEVVNAGIAT
PLPSTAGLID IPIAAGTRNF AREPAMSRDQ AIAAMQAGAA RVRHHAALGT NVIGFGEMGI
ANTSAAACLM SRLCGVPIDE CVGRGTGLDN AGLAKKRNVL ASALARHPVS SDPLDVLATF
GGFEIAMMAG AYLAAAEARM TILVDGFIGT SALLIADAFA PSMREYCVFA HASNEAGHRR
MLDHFGALPL LSLDMRLGEG TGAALAVPLL RAATAFINEM ASFESAGVTN RDA
|
|---|
| |