| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0991 |
|---|
| Symbol | |
|---|
| ID | 6281093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 1113571 |
|---|
| End bp | 1114302 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642620551 |
|---|
| Product | protein of unknown function DUF541 |
|---|
| Protein accession | YP_001894634 |
|---|
| Protein GI | 187922992 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3471] Predicted periplasmic/secreted protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.252939 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAAA ACACCGCACG TGCACTCGCT TTCGCTCTCG TCTGCGCCGC GCCCGCCGCG
CTCGCACTCA CGCCGGCCAT GGCACGCGCG CAAAGCACCG GCCAATATCA GCCGGCCGGC
GTGCTGTCGC TGAACGCGCA GGCCAGCGCG GAAGTGCCGC AAGACGTCGT CGATATCACG
CTGTTCTACG AGCAGGAAGC GAGCGATCCG TCGGCGCTCA CGTCAACGCT GAACCAGCGC
GCCGATTCGG CGCTGCAAAA AGCCAAGGGT GTGAACGGCG TGACGGCGCG CACGGGCTCG
TTCTCGATCT ATCCGTCCAC CGATCGCGAC GGGCGCATTT CCGCATGGCG CGGCCGCACG
GAGATCGTGC TCGAATCGCA CGACTTCGCC GCAGTGTCGA AGCTCGCGGG TCAAATGGCA
TCGATCATGC AGGTCGGCAA CGTGCAGTTC TCGCTCTCGC CAGAAGCGCA GCGCGCGGCC
GAGCAGAAGC TCACCAGCGA AGCGATCAGG TCGTTCCGCG AGCAGGCCGC TTCGTCCGCG
CAGGCGTTCG GCTACAGCGG TTATTCGATT CGCGAGGTCA ACGTCGGGCA CAACGGCGTG
ATGCCGCGTC CGGTGATGAT GATGAGCGCG CGCGCCATGG GCGCCGACGC AAAGTCCGCG
GCGCCGGTGC CGATCGAAGG CGGCACGTCG ACGGTGACCG TCAACGTGTC GGGCTCGGTG
CAGATGAAGT AA
|
|---|
| Protein sequence | MTKNTARALA FALVCAAPAA LALTPAMARA QSTGQYQPAG VLSLNAQASA EVPQDVVDIT
LFYEQEASDP SALTSTLNQR ADSALQKAKG VNGVTARTGS FSIYPSTDRD GRISAWRGRT
EIVLESHDFA AVSKLAGQMA SIMQVGNVQF SLSPEAQRAA EQKLTSEAIR SFREQAASSA
QAFGYSGYSI REVNVGHNGV MPRPVMMMSA RAMGADAKSA APVPIEGGTS TVTVNVSGSV
QMK
|
|---|
| |