| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0989 |
|---|
| Symbol | |
|---|
| ID | 6281091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1111456 |
|---|
| End bp | 1112421 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642620549 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001894632 |
|---|
| Protein GI | 187922990 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCTG CCATTCCTGA TTTGCGCCAG TTGCGCTATT TCGTGACCGT CGCCGAAGAG
AAGCACTTCG GGCGCGCGGC CGTGCGCCTC TCGATGACGC AGCCGCCTTT GTCGCAAGCC
ATCCGCGCGC TCGAAGAGAC GCTCGGCGTC GAATTGTTCG CGCGCACCAA GCGTTCCGTC
GAACTGACGT CGGTGGGCGC CGATCTGCTG CCCGAGGTGC AACGCCTGCT CGCAAGCGCG
GAGGGGCTGC GGCCGCTCGC GCAGAGCCTG GCGCGCGGCG AGGCCGGCGT GTTGTCGCTG
GCGTTCGTGT CCACCGCGGA CTATGGCCTG CTGCCGCTGC TGCTGCGCGA TTTCGGTGCG
CGTCATCCGC GCGTGCGGCT GGAATTGACC GAAGCCACCA GCGACATACA AGTCGACGAA
CTGGTGGCCG GGCGCATCGA CGCGGGTCTC GTGATCGCAC CGCTGCCGTC GCGCCACGCC
ACCGAACTCT CGTGGCTGCC GATCGCGCGC GAGCCGCTGG TGATCGCCAT GTCGACGGAG
ATGGCGGCGC GCCTGGCGAG CGCCAGTGGC GACCATGCCG ACCCGCGCGC CGAATGGCTT
GACACGCCGA TCAGCCTGCG CGATGTTGCC GACGCACCGC TCGTGGTGTT CCCAAGACGT
TTGGCGCCAG GCTTTTATGA CATCATTATG GATTGCTACG GCGTGGCGGG CCTTGCGCCC
CGGGTCGGCC AGGAAGCGAT CCAGATGCAA ACGATCGTGA GCCTCGTGTC AGCCGGCATG
GGTGTCGCAC TGGTACCGCA ATCGTTACGT AATCTGCGCC GCACCGGCGT CGTGTATCGT
CCGCTTTGCG AGTCGGTGCC CGCGATCGAG ACAGGCCTCG TCTGGCGGAC CGCCGAGGTG
AGCCCGGTGC TGGCGGGTTT CATCGACATC GTGCGGGCGC ATGCGGCGAC CGTCGAGGCG
CAATAA
|
|---|
| Protein sequence | MLPAIPDLRQ LRYFVTVAEE KHFGRAAVRL SMTQPPLSQA IRALEETLGV ELFARTKRSV
ELTSVGADLL PEVQRLLASA EGLRPLAQSL ARGEAGVLSL AFVSTADYGL LPLLLRDFGA
RHPRVRLELT EATSDIQVDE LVAGRIDAGL VIAPLPSRHA TELSWLPIAR EPLVIAMSTE
MAARLASASG DHADPRAEWL DTPISLRDVA DAPLVVFPRR LAPGFYDIIM DCYGVAGLAP
RVGQEAIQMQ TIVSLVSAGM GVALVPQSLR NLRRTGVVYR PLCESVPAIE TGLVWRTAEV
SPVLAGFIDI VRAHAATVEA Q
|
|---|
| |