| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0980 |
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| Symbol | |
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| ID | 6282724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1102575 |
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| End bp | 1103366 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642620540 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001894623 |
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| Protein GI | 187922981 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAACCA TCGACCTTCT CAGACCCACT CCCGGACTGC GCGTACTGAT TTCAGGCGCT
GCGGCGGGCA TCGGCGCAGC GATCGCGCAG GCGTTTCTGG ATGTCGGCGC GAACGTCTAT
ATCTGCGACG TCGATCCCGC CGCGATCGAC CGCGCCAGAA CCGCGCATCC GCAACTGCAC
GCCGGCGTCG CGGACGTGTC GGATTGCGCG CAGGTAGACC GCATCATCGA CGACGCGCGC
TCGAAGCTCG GCGGCCTCGA TCTGCTGATC AACAACGCGG GCATTGCCGG ACCCACCGGC
GCGGTCGAGG ACCTCGATCC GGCGGAGTGG GAACGCACGA TCGGGACGAA CCTGAACAGC
CAGTTCTATT TTCTGCGCAA GGCCGTGCCG CTGCTGAAGG AAACGTCGGC CAACCCGGGC
ATCATTGCGA TGGCGTCGGT CGCGGGACGC CTCGGTTACG CGTTCCGCAC GCCGTACGCG
GCGAGCAAAT GGGCGATTGT CGGGATGGTC AAGTCGCTGG CGATCGAGCT TGGACCGAAC
AATGTGCGCG TGAACGCAAT CTTGCCGGGC GTCGTGGAAG GCGAACGGAT GGACCGCGTG
ATTTCCGCGC GCGCCGAATC ACTCGGAATC GGCTTCGATC AGATGAAGGG CGAATATCTG
CAGAAAATTT CGCTGCGACG GATGGTGACC GTGCACGACG TCGCCGCAAT GGCGCTGTTC
CTCGCTTCGC CGGCGGGGCA AAACATTTCG GGGCAGGCAA TCAGCGTCGA CGGGAATGTC
GAATATCTTT GA
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| Protein sequence | MKTIDLLRPT PGLRVLISGA AAGIGAAIAQ AFLDVGANVY ICDVDPAAID RARTAHPQLH
AGVADVSDCA QVDRIIDDAR SKLGGLDLLI NNAGIAGPTG AVEDLDPAEW ERTIGTNLNS
QFYFLRKAVP LLKETSANPG IIAMASVAGR LGYAFRTPYA ASKWAIVGMV KSLAIELGPN
NVRVNAILPG VVEGERMDRV ISARAESLGI GFDQMKGEYL QKISLRRMVT VHDVAAMALF
LASPAGQNIS GQAISVDGNV EYL
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