Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0979 |
Symbol | |
ID | 6282723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1101818 |
End bp | 1102558 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642620539 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001894622 |
Protein GI | 187922980 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGATTGA ACGGAAAGGT CACCATCGTG ACGGGCGCGG GGCAGGGCAT CGGCGCTGCG ACCGCACTCA AATTCGCGAA AGAAGGTGCG CGCGTCGCGG TGTGCGACGT GAATCACGAC GCGGTGTCCC GAGTCGTGGC CGCGTGCCAC GCGGCGGGTG CGCAAGCGCT CGGCTTCACG CTCGACGTGA CGAACCGCGC TGCGGTGGAC GGCATGGTCG CCGACGTGCG CGAGCGGTTC CGGCAGATCG ACGTGCTGGT GAACAACGCA GGCATCACGC GCGACGCGCG CCTGCAAAAG ATGACGCTCC AGCAATTCGA CGATGTGATC GACGTGAACC TGCGCGGCGT GTTCCATGCG GCGCAGGCGG TCGTCGACAC GATGATCGCT CAAGGCTCGG GCGTGATCCT GAATGCAAGT TCCGTGGTCG GCCTCTACGG CAACTACGGC CAGACCAACT ATGCGGCGGC GAAGTTCGGC GTGATCGGCT TTACGAAAAC ATGGAGCCGC GAACTGGGAC CGAAGGGCAT TCGCGTCAAC GCGATTGCGC CGGGCTTCAT CGACACGCCG ATTCTCTCGA CCGTGCCGCA GGAAGTGCTC GCGAAAATGC GCGAGCAGGT GCCGCTGCGC CGGCTCGGCA CGCCCGAGGA GATCGCCAAT ATCTACGCCT TTCTCGCGAG CGACGAAGCG AGCTATATCA ACGGCGCCGT GATCGAAGCA TCCGGCGGTA TGACGCTTTA A
|
Protein sequence | MRLNGKVTIV TGAGQGIGAA TALKFAKEGA RVAVCDVNHD AVSRVVAACH AAGAQALGFT LDVTNRAAVD GMVADVRERF RQIDVLVNNA GITRDARLQK MTLQQFDDVI DVNLRGVFHA AQAVVDTMIA QGSGVILNAS SVVGLYGNYG QTNYAAAKFG VIGFTKTWSR ELGPKGIRVN AIAPGFIDTP ILSTVPQEVL AKMREQVPLR RLGTPEEIAN IYAFLASDEA SYINGAVIEA SGGMTL
|
| |