| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0979 |
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| Symbol | |
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| ID | 6282723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1101818 |
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| End bp | 1102558 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642620539 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001894622 |
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| Protein GI | 187922980 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTGA ACGGAAAGGT CACCATCGTG ACGGGCGCGG GGCAGGGCAT CGGCGCTGCG
ACCGCACTCA AATTCGCGAA AGAAGGTGCG CGCGTCGCGG TGTGCGACGT GAATCACGAC
GCGGTGTCCC GAGTCGTGGC CGCGTGCCAC GCGGCGGGTG CGCAAGCGCT CGGCTTCACG
CTCGACGTGA CGAACCGCGC TGCGGTGGAC GGCATGGTCG CCGACGTGCG CGAGCGGTTC
CGGCAGATCG ACGTGCTGGT GAACAACGCA GGCATCACGC GCGACGCGCG CCTGCAAAAG
ATGACGCTCC AGCAATTCGA CGATGTGATC GACGTGAACC TGCGCGGCGT GTTCCATGCG
GCGCAGGCGG TCGTCGACAC GATGATCGCT CAAGGCTCGG GCGTGATCCT GAATGCAAGT
TCCGTGGTCG GCCTCTACGG CAACTACGGC CAGACCAACT ATGCGGCGGC GAAGTTCGGC
GTGATCGGCT TTACGAAAAC ATGGAGCCGC GAACTGGGAC CGAAGGGCAT TCGCGTCAAC
GCGATTGCGC CGGGCTTCAT CGACACGCCG ATTCTCTCGA CCGTGCCGCA GGAAGTGCTC
GCGAAAATGC GCGAGCAGGT GCCGCTGCGC CGGCTCGGCA CGCCCGAGGA GATCGCCAAT
ATCTACGCCT TTCTCGCGAG CGACGAAGCG AGCTATATCA ACGGCGCCGT GATCGAAGCA
TCCGGCGGTA TGACGCTTTA A
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| Protein sequence | MRLNGKVTIV TGAGQGIGAA TALKFAKEGA RVAVCDVNHD AVSRVVAACH AAGAQALGFT
LDVTNRAAVD GMVADVRERF RQIDVLVNNA GITRDARLQK MTLQQFDDVI DVNLRGVFHA
AQAVVDTMIA QGSGVILNAS SVVGLYGNYG QTNYAAAKFG VIGFTKTWSR ELGPKGIRVN
AIAPGFIDTP ILSTVPQEVL AKMREQVPLR RLGTPEEIAN IYAFLASDEA SYINGAVIEA
SGGMTL
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