| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0965 |
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| Symbol | |
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| ID | 6283272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1086820 |
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| End bp | 1087869 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642620525 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_001894608 |
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| Protein GI | 187922966 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA TCCAAGGGCC GGCAATCTTT CTCGCCCAGT TCATGGGCGA CGAAGTGCCG
TTCGACAACC TCGCGCATCT TGCCGAGTGG GCCGCGGGTC TCGGCTTCAA GGGGATTCAG
GTGCCGTGCG ACAGCCGCCT GATCGATCTC GAACAGGCGG CGGCGAGCCA GACGTATTGC
GACGAGTTGC GCGAGATCGT GGACAACGCG GGCGTGACGA TCACCGAACT CTCGACGCAT
CTGCAAGGGC AGCTCGTCGC TGTGCATCCG GCGTATGACG CGTTATTCGA CGGCTTTGCC
GCGCCGCATG TGCGCGGCGA TCCGGCCGCA CGCACGCAGT GGGCGATCGA GCAGATGAAG
CTCGCGGCGA AGGCGTCGCA GCGTTTGGGA TTGACCACAC ACGTGTCGTT TTCAGGGGCG
CTCGCGTGGC CGTATTTGTA CCCGTGGCCG CAGCGTCCCG CAGGTTTGGT CGAAGCGGCG
TTCGACGAAC TCGCACGCCG CTGGACGCCG ATTCTCGATG CCTTCGACGC AGCAGGCGTG
GACGTGTGCT ACGAACTGCA TCCCGGTGAA GACCTGCACG ACGGCGTGAC CTTCGAGCGG
TTTCTCGACG CGGTGAAGCA GCATGCGCGC GCCAACATCC TCTACGATCC AAGCCATTTC
GTTTTGCAGC AGCTCGACTA CCTTGCGTTC ATCGACATCT ATCACGAGCG CATCAAGGCG
TTCCATGTGA AGGACGCGGA GTTTCGTCCG AACGGCAAGC AGGGCGTGTA TGGCGGCTAT
AGCGGCTGGG TCGAGCGGGC GGGGCGCTTC AGATCGCTCG GCGACGGCCA GATCGATTTC
GGCGCGATCT TCTCGAAGAT GGCGCAATAC GATTTTCCGG GCTGGGCCGT GCTCGAATGG
GAGTGCGCGC TGAAGCATCC GCACGACGGC GCACGCGAAG GCGCCGAGTT TATTCGGCGG
CACATCATCC GCGTGGCCGA GCATGCATTC GACGATTTCG CGGGCAGCGG CGTGGATGCC
GCGCAGTTGA AGCGTGTGCT CGGCATTTAA
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| Protein sequence | MKTIQGPAIF LAQFMGDEVP FDNLAHLAEW AAGLGFKGIQ VPCDSRLIDL EQAAASQTYC
DELREIVDNA GVTITELSTH LQGQLVAVHP AYDALFDGFA APHVRGDPAA RTQWAIEQMK
LAAKASQRLG LTTHVSFSGA LAWPYLYPWP QRPAGLVEAA FDELARRWTP ILDAFDAAGV
DVCYELHPGE DLHDGVTFER FLDAVKQHAR ANILYDPSHF VLQQLDYLAF IDIYHERIKA
FHVKDAEFRP NGKQGVYGGY SGWVERAGRF RSLGDGQIDF GAIFSKMAQY DFPGWAVLEW
ECALKHPHDG AREGAEFIRR HIIRVAEHAF DDFAGSGVDA AQLKRVLGI
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