| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0952 |
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| Symbol | |
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| ID | 6282436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1071463 |
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| End bp | 1072647 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642620512 |
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| Product | urea ABC transporter, permease protein UrtC |
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| Protein accession | YP_001894595 |
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| Protein GI | 187922953 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCGG CAACTTCATC GGCTCACGTC GGTGCAACTA GCGGTGGCGC CGGCGCCGGA
CGCGAGCCGC AATCCGGTTT CGCACTCGGC CTGCCGCCGC GTCCCGCGCT ATTGTCGCGG
CGCGCGTGGC TTGCGCTGAT TGCGCTGATC GTCGTCTTCG GTTTGGGCGT GCCGTTCTGC
ACTCTGGTCG TGCCGGAGAC GAGCGCGCTG CATCTGTCCG CCTACGCGAT GACGATCACC
GGCAAGTTCA TGTGCTACGC GATCGCGGCG CTGGCGCTCG ATCTCGTGTG GGGCTACTGC
GGGATTCTGA GCCTCGGCCA CGCGCTGTTC TTCGCGCTCG GCGGCTACGC GATCGGCATG
TATCTGATGC GCTCGATCGG CCACGAAGGC AAGTACGGCA GCGACCTGCC CGACTTCATG
GTGTTCCTCG ACTGGCATCA ACTGCCGTGG TACTGGCAAG GCACGCAACA CCTCGGCTAC
GCGCTGCTGC TGGTGGTACT GGTGCCGGCG GTAGTCGCGT GGGTATTCGG CTTCTTCACG
TTCCGCTCGC GGGTGAAGGG CGTGTATCTG TCGATCATCA CGCAGGCCAT GACCTTCGCC
GCGATGCTGC TGTTCTATCG CAACGAAACC GGCTTCGGCG GCAATAACGG CTTTACCGAC
TTCAAGCGCA TCGGCGGCTT TCCGATCACG CATCCGGGCA CACGCACTGC CCTGCTGCTG
ATCACGTTTG CCGTGCTGAT TCTCGCATTT CTCGGCGCGC GGGCCATCGT CACCTCGAAG
CTCGGCCGCG TGGTGACCGC GGTGCGCGAC GGCGAAACGC GTTTGATGTT CCTCGGCTAC
AGCCCGCTTG CGTACAAGCT GTTCGTGTGG ACCGTGTCGG CCGTGTTGTG CGGCATCGCC
GGCGCGTTGT ATGTGCCGCA GGTCGGCATC ATCAATCCCG GTGAAATGTC GCCGGGCAAC
TCGATCGAAA TGGCGATCTG GGTCGCCGTG GGTGGACGCG GCACGCTGAT CGGCCCGATC
ATCGGCGCTT TCGCGGTGAA TGGCGCGAAG AGCTTTTTCA CGGCGAACTT CCCTGAATAC
TGGCTGTTCT TTCTCGGTCT GATTTTCGTG CTGGTCCCGC TGTTCCTGCC GAACGGCATC
ATGGGGCTGA TCGACCTCGT GACGCGCAAG AGGAACCGCT CATGA
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| Protein sequence | MTSATSSAHV GATSGGAGAG REPQSGFALG LPPRPALLSR RAWLALIALI VVFGLGVPFC
TLVVPETSAL HLSAYAMTIT GKFMCYAIAA LALDLVWGYC GILSLGHALF FALGGYAIGM
YLMRSIGHEG KYGSDLPDFM VFLDWHQLPW YWQGTQHLGY ALLLVVLVPA VVAWVFGFFT
FRSRVKGVYL SIITQAMTFA AMLLFYRNET GFGGNNGFTD FKRIGGFPIT HPGTRTALLL
ITFAVLILAF LGARAIVTSK LGRVVTAVRD GETRLMFLGY SPLAYKLFVW TVSAVLCGIA
GALYVPQVGI INPGEMSPGN SIEMAIWVAV GGRGTLIGPI IGAFAVNGAK SFFTANFPEY
WLFFLGLIFV LVPLFLPNGI MGLIDLVTRK RNRS
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