| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0947 |
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| Symbol | |
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| ID | 6284167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1066387 |
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| End bp | 1067499 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642620507 |
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| Product | type VI secretion protein, VC_A0111 family |
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| Protein accession | YP_001894590 |
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| Protein GI | 187922948 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGCG CCTCATTTAC GTCGACGCTG CGCGACACGA CGCTATCGGC GGATGCAGTC
GAGCGGCTGC AGACGCAGCC GTGGCAATTC GGATTTTTCT CGCTGATGCG CCGCATCGGC
GCCGATGTGC GTATCGATGC GATCGGCAAG GCGCGGCGTC CGCGTGCGGA GCCATTCCGG
CTAGGTCAGA AGCCGAGCCT TGCATTCGCG CCGCGTGAGA TCGCCAGTGT GGGCGAACTC
GGCGGGCGCC TGCATATTCG TCTGTTAGCA CTCGGCATGC TTGGGCCGAA TGGGCCGCTG
CCCATCCACA TGACGGAGAT TGCCAGGGAG CGTGAAGAAA GCCGGCGCGA TCCTACGCTG
GTTCATTTCC TCGATATTTT TCACCATCGC TACCTCACGC TGTTGTACCG CGCATGGGCC
GACGCACAGG CGACCGCTGG ACTCGACCGT GCCGGGCCCG ATAGCGAACG ATTCTCCTTC
TATGTCGCGA GCCTGACCGG CCAGGATACG CGCGAGATTG GGCAGCGCGC TCTGCCCGCA
CACGCGCAAC TTGCCGCGTC TGCGAATCTC GTGCGTGAAG CCCGCAACCC GGATGGCTTG
CGCATGACGC TCGAGCAGTA TTTCGGGGTT CCCGTCGCGA TCGAGGAGTT CGTTTTTAAC
TGGATCGACG TTGCTGCCGA CGATCACAGC TATATCGGCA AGCCCGGCGC CGCGGCGACG
ATGGGCGACG GCGCGATGCT CGGGGAGCAG GTGCCCGATC GTCAGCACCG TTTCCGGATC
ATCATCGGGC CGGTCGATAT CGACGAATAT CTGCGCTTCA CGCCTCGCGG CGCGGATCTG
CCGCAACTGG TCGATTGGGT ACGGAGTTTC ATCGGTCGCG AATTCGAATG GGAGCTGGAG
TTGCGCATCC GCGCACAAAG CGCGCCGCCT GCCGTGATGG GCGGCCCGCA GCAATTGGGC
TGGTCGGGGT GGCTCGGTCG CTCGCCCAGC GGCGAGCCGA TTACCGGCAT GCGCTTCGAG
CCTGAACGCT ACGCCAGCAC GTTCGCGAAA CAAAGTATCG ACGCGGCGGG CAAGCGCCGG
GTCACGCCGC AAGTGAAGGG ACAAGATGAG TAG
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| Protein sequence | MDRASFTSTL RDTTLSADAV ERLQTQPWQF GFFSLMRRIG ADVRIDAIGK ARRPRAEPFR
LGQKPSLAFA PREIASVGEL GGRLHIRLLA LGMLGPNGPL PIHMTEIARE REESRRDPTL
VHFLDIFHHR YLTLLYRAWA DAQATAGLDR AGPDSERFSF YVASLTGQDT REIGQRALPA
HAQLAASANL VREARNPDGL RMTLEQYFGV PVAIEEFVFN WIDVAADDHS YIGKPGAAAT
MGDGAMLGEQ VPDRQHRFRI IIGPVDIDEY LRFTPRGADL PQLVDWVRSF IGREFEWELE
LRIRAQSAPP AVMGGPQQLG WSGWLGRSPS GEPITGMRFE PERYASTFAK QSIDAAGKRR
VTPQVKGQDE
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