| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0942 |
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| Symbol | |
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| ID | 6280942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1059058 |
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| End bp | 1061778 |
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| Gene Length | 2721 bp |
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| Protein Length | 906 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642620502 |
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| Product | type VI secretion ATPase, ClpV1 family |
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| Protein accession | YP_001894585 |
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| Protein GI | 187922943 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTT CCCGCCAGGC ACTCTTTGGC AAGCTCGGGG CCACACTCTT CCGCAGCATC
GAATCCGCTA CCGCGTTTTG CAAGCTGCGC GGCAACCCGT ATGTGGAGCT TGTCCATTGG
CTGCATCAAT TGCTGCAATT ACCGGACAGC GACATGCACC GCATTGCCCG GCATGCGGGA
ATCGAACGTA CAACACTGGA ACGCGATCTC GCACGGGCGC TCGCCGCCTT GCCCGCAGGC
GCCAGTTCGA TCAGCGACAT CTCGCACCAT ATTGAACTGG CCGTCGAGCG AGCATGGGTG
CTTGCCACGC TCGATTTCGG CGACCGCCGG ATACGCGGCG CGTGGTTGCT TGCAGCATTG
CTTGGCACGC CGGAACTGCG TCGGGTACTG CTTTCGGCTT CGCCCGCATT CGCTCGCATC
CCGGTCGATA CGCCACGCGA CGAACTGATT GCGTGGATCG ACGGCTCGCC CGAATCTTCC
GACTCGCCGT ACGACAACAC GGACTTCTCC GCCGCAGCGC CGGGCGAGGC TTCGCAGGCA
CTGCCCGCAG GTTCGAAGAA CTCGCCAATC GAGCAGTACT GCAGCGACCT GAGCGCGCGA
GCCCGCGCAG GTGAAATCGA CATCGTGACG GGACGCGAGC AGGAGATTCG CACGATCATC
GATATCCTGC TGCGCCGCCG TCAAAACAAC CCGCTGCTCA CTGGCGAGGC CGGCGTCGGC
AAGACCGCTG TCGTAGAAGG GCTCGCACTT GCCATCGCTA ACGGCGACGT GCCGCCCGCG
CTGGCCGACG TGCGGCTCAT GACGCTCGAC GTCGGCGCAT TGCTGGCTGG TGCGAGTATG
AAAGGGGAAT TCGAGTCGCG GCTCAAAGGC GTGCTCGAAG CCGCGTTACG GTCCAAGACA
CCCATCATTC TGTTCGTCGA CGAAATCCAC ACGCTCGTCG GCGCGGGCGG TCAGGCCGGC
ACCGGCGACG CCGCCAATCT TCTCAAGCCG GCCCTCGCGC GAGGCGCGGT GCGCATGATC
GGAGCGACGA CCTGGTCGGA GTACAAGCGG CACATCGAAA AAGATCCCGC TCTCACCCGG
CGCTTTCAGG TACTGCAGGT CCCCGAACCG CAGGAAGCCG CAGCCATCGA CATGGTGCGG
GGACTGGCCG ACACGTTTTC GAAGCACCAC GGCGTGATTG TCCGAGACGA AGCGATCCGC
GCCGCCGTTA CGTTGTCCCA TCGCTATATT CCTTCGCGGC AGTTGCCCGA CAAGGCGATC
AGTCTGCTCG ACACCGCATG CGCACGCGTG GCGCTCTCGC AGCATGCGCC GCCGCGCGAA
CTGCAAAGCG TGCGTCAACG ACTTCAGGCG GCGCGCGTCG AGTGTGGCCT GCTTGAACAG
GAGGCGCGTA TCGGACTCCA TGCGGAGGAG GCGCTGAGTG CCGCCAGGGC GCGCATCGGT
ACGCTCTCCA CGGAGGAAAG CGCAATCGAC GCACATTGGC GCGCCCAGCT CGCAGCCGCA
CAGGCGTTAG CGAGCGCCCG CGACGCCATC CTTACCCAGC CCGCCCCGGA TCAAGCCGAT
GTTGTGCCAT CCCTCGCGAC ACTCGGCCAG CTGGAGCACA GCCTCCTTGA CCTTCAGGGT
GAGACGCCAC TCGTTTTCCC GGAAGTAGAC GAAACGGTCA TCGCGGAAAT CGTCTCGGAC
TGGACCGGCA TTCCCGTCGG TCGCATGGTA ACGAATGAAG TTGCGGCTGT GCGCGCCTTG
CCCGAAACAC TCGCCGCCCG CGTGATCGGG CAAAGTGATC CCTTGCGCCA GATCGGTGAG
CGAGTGCAGA CGGCGCGCGC GGGTCTTACC GATCCCCGCA AACCACTCGG CGTGTTTCTG
CTGGCGGGGC CGTCCGGCGT CGGCAAGACG GAAACGGCGC TCGCACTGGC CGAAGCTCTG
TATGGCGGCG AGCAGAACCT GATCACGATC AACATGAGCG AGTATCAGGA GGCGCACACG
GTCTCCGGAC TCAAGGGCGC ACCGCCCGGA TACGTCGGTT ACGGTGAAGG CGGCGTGCTG
ACAGAAGCCG TCCGCCGGCG CCCGTATGCA GTTGTTCTGC TCGACGAGAT CGAAAAGGCG
CATCACGACG TACATGAAAT GTTCTTCCAG GTGTTCGACA AGGGCTACAT GGAAGACGGC
GACGGACGCT ACATCGACTT CCGCAATACC ACGATCCTTT TGACCAGCAA TGCCGGGTCC
GAGCTGACAG CGAGCCTATG CGCGGACGCC ACACTCGCAC CCGATCAGGA CGCCCTACGT
GAAGCGTTAA ACCCTGAGTT GCTCAAAGTA TTTCCCGCGG CCTTTCTCGG ACGCGTGACC
GTCGTGCCGT ATCGCCCGCT GGTTCACGCG TCGCTCGCCA GCATCGTGCG TCTGCATATG
AACCGTGTCG TGCAGCGCAT GGCGGACAGT CATGGTATTG CACTGCATTA CAACGAACAG
GTAATCGACT ACATCGTCAG CCGCTGCCTC GTGCAGGAGA CCGGCGCCCG GGTGTTGATC
GGGTTTATCG AGCAACACGT TCTGCCGAGA CTGTCTGCTC TCTGGCTCGA CGCTTTCTCG
TCGAAGCGAG TCCTCTCGAG CATCGAAATC CAGATCGGCG ACAGCAACGT CACGCCTGCT
GCCGCATTCG TCTTTGCATC TGCCAACAAG CCAGCGTTCA GCGAGAGCAT TTCCCCGGTT
TCAGTCGGCG AGACTCATTA A
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| Protein sequence | MTISRQALFG KLGATLFRSI ESATAFCKLR GNPYVELVHW LHQLLQLPDS DMHRIARHAG
IERTTLERDL ARALAALPAG ASSISDISHH IELAVERAWV LATLDFGDRR IRGAWLLAAL
LGTPELRRVL LSASPAFARI PVDTPRDELI AWIDGSPESS DSPYDNTDFS AAAPGEASQA
LPAGSKNSPI EQYCSDLSAR ARAGEIDIVT GREQEIRTII DILLRRRQNN PLLTGEAGVG
KTAVVEGLAL AIANGDVPPA LADVRLMTLD VGALLAGASM KGEFESRLKG VLEAALRSKT
PIILFVDEIH TLVGAGGQAG TGDAANLLKP ALARGAVRMI GATTWSEYKR HIEKDPALTR
RFQVLQVPEP QEAAAIDMVR GLADTFSKHH GVIVRDEAIR AAVTLSHRYI PSRQLPDKAI
SLLDTACARV ALSQHAPPRE LQSVRQRLQA ARVECGLLEQ EARIGLHAEE ALSAARARIG
TLSTEESAID AHWRAQLAAA QALASARDAI LTQPAPDQAD VVPSLATLGQ LEHSLLDLQG
ETPLVFPEVD ETVIAEIVSD WTGIPVGRMV TNEVAAVRAL PETLAARVIG QSDPLRQIGE
RVQTARAGLT DPRKPLGVFL LAGPSGVGKT ETALALAEAL YGGEQNLITI NMSEYQEAHT
VSGLKGAPPG YVGYGEGGVL TEAVRRRPYA VVLLDEIEKA HHDVHEMFFQ VFDKGYMEDG
DGRYIDFRNT TILLTSNAGS ELTASLCADA TLAPDQDALR EALNPELLKV FPAAFLGRVT
VVPYRPLVHA SLASIVRLHM NRVVQRMADS HGIALHYNEQ VIDYIVSRCL VQETGARVLI
GFIEQHVLPR LSALWLDAFS SKRVLSSIEI QIGDSNVTPA AAFVFASANK PAFSESISPV
SVGETH
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