| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0935 |
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| Symbol | |
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| ID | 6284529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1052341 |
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| End bp | 1053585 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642620495 |
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| Product | hypothetical protein |
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| Protein accession | YP_001894578 |
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| Protein GI | 187922936 |
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| COG category | [N] Cell motility
[S] Function unknown |
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| COG ID | [COG1360] Flagellar motor protein
[COG3455] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family
[TIGR03350] type VI secretion system OmpA/MotB family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAAAA AAACCGGCGA CTCGGCGTCC GGCGCGAAGC CCGAACTGCC GGCCACGTTG
CTCGCGAGCA TCCCCGCCGG TGAACCGCAA GCCGCCCGCC TGCAGGCCGT GGAGGACGCG
ACCAATCCGC TGCTGGAGGC CGCGCGCCCT TTGCTGCGCG CGCTCGCCGA CATGCCGGAC
AATCTGGATC TGACGGCCAT CGATCAGCTT CACCTGCTGC TCAAACAGGA GGTGCGCACC
TTCCAGCGAC TGTGCGAGCA AGCGAATATC AGGCGCGATC ACATGATCGG CGCGCGTTAC
TGTCTGGCCA CGGCGCTCGA TGAGGCCGCC GGAAAGACCG TTTGGGGTCA ACGCGAAACC
GGCGTCGAAT GGCTTCGCAA AGGCTTGGCC ACCGAATTCC ACGAGGACCG CCAAGGCGGC
GACAAGGTCT ATCTGCTGAT CGGACGGCTG ATGAACGAGC CGCGCGAGCA TCTCGACCTG
CTCGAAGTGA TCTATCGGAT CCTGAGCCTC GGCTTCATGG GCCGTTACCG CCATGAAGCC
GACGGCGCCC GCAAGCATGA CGCCGTGCGT CAACGGCTCT ACAACGAGAT CCAGACGCAG
CGCGGCGTCG TGCCGATCGC GCTGTCGCCG CGAGTGCAAT CCGACTCCCG CGGACAGCGT
CTGTCGGTCT ACGACTTTCC GGTCCGGATC ACGTTTGCCG TTCTCGGGCT GATCCTGCTC
GGCCTGTTCG GCTGGTTCAA ATACCATCTG CTCAACCATG GCGCGAGCGT CGAGAAGCAG
ATCACCGATA TCGGCCATCT GACGCCGCCG GCCCCACGCC TGCCCCACCT CAAGGAACTG
CTGAAGAACG AGATTGCGGC CGGCACGGTC AGTGTCGACG AAGACGCCCG TCATAGCTCC
GTGACATTCC GCGGCGACGC AATGTTCCCG CCGGGTGGCG TCAACGTCAA CGCGTCGATG
GGGCCGCTGA TCGCGAAGAT CGCGAGCGAA ATCGGCAAGG TGCCCGGCAA GGTCACCGTC
ACCGGCCACA CCGACAACCT GCCGATCAGA AGCCGCCAGT TCGCATCGAA CGATGCGCTC
TCCGAAGAGC GCGCAACCCA GGTCATGCAG ATGCTGCAAG CATCGGGCGT GGCGGCGGCG
CGGCTCGAGG CGATCGGCGG CGGCGAGGCG AATCCGATTG GCGACAACGC AACGGCGCAA
GGCCGCGCGC AGAACCGCCG CGTAGAAATT ACGGTCACCC CCTGA
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| Protein sequence | MEKKTGDSAS GAKPELPATL LASIPAGEPQ AARLQAVEDA TNPLLEAARP LLRALADMPD
NLDLTAIDQL HLLLKQEVRT FQRLCEQANI RRDHMIGARY CLATALDEAA GKTVWGQRET
GVEWLRKGLA TEFHEDRQGG DKVYLLIGRL MNEPREHLDL LEVIYRILSL GFMGRYRHEA
DGARKHDAVR QRLYNEIQTQ RGVVPIALSP RVQSDSRGQR LSVYDFPVRI TFAVLGLILL
GLFGWFKYHL LNHGASVEKQ ITDIGHLTPP APRLPHLKEL LKNEIAAGTV SVDEDARHSS
VTFRGDAMFP PGGVNVNASM GPLIAKIASE IGKVPGKVTV TGHTDNLPIR SRQFASNDAL
SEERATQVMQ MLQASGVAAA RLEAIGGGEA NPIGDNATAQ GRAQNRRVEI TVTP
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