Gene Bphyt_0931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0931 
Symbol 
ID6282163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1044264 
End bp1045067 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content65% 
IMG OID642620491 
Productextracellular solute-binding protein family 3 
Protein accessionYP_001894574 
Protein GI187922932 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGAT CGATTCTTCG CCCCGCGCGT CGCGCCTGGC TCGCCGCACT GTTGCTCTCG 
CCCGTCCTCG CCGTCAATGC GCCCGCCGCT CACGCGGATA CGCTCGATAA CATCGCCAAA
GCCGGCGTCC TCAAGGTCGC CGTGCCGGAA GACTATCCGC CGTTCGGTTC GGTCGGCGCG
GACATGAAGC CGCAGGGCTA CGACATCGAC ACCGCCGCCC TGCTCGCGAA GTCGATGAAC
GTGAAGCTCG AACTCGTGCC GGTCAACAGC GCCAACCGCA TTCCGTATCT GCAAACGGGC
AAGGTGGACC TGGTGATCTC GTCGCTCGGC AAGACGCCGG ATCGCGAGAA GGTGATCGAC
TTCTCGACCG CCTACGCGCC GTACTACCAG GGCGTGTTCG GTCCCGCCGA CATCAAGGTG
AGCGGCCCGG CCGATCTGAC CGGCAAAACG GTCGGCGCAA CCCGCGGCGC ACTCGAGGAA
ATCGGTCTCA CGCAAATGGC GCCGAACGCG ACCATCAAGC GCTTCGAGGA CAACAACGCG
ACCATCGCCG CGTTTCTGTC GGGCCAGGTG CAGCTGATCG CGGCGGGCAA CATCGTCGCG
GCCGCGATCC TCGCGAAGAA TCCGCCGCGC CGCCCGGAGC CGAAATTCGT CATCAAGAAT
TCGCCGTGCT TCGTCGGTAT GAACAAGAAC GAGCCACGCC TGCAGCAGAA AGTGAACGCC
GCCATCGCGC AGGCGAAGCA GGACGGCACG CTCAACACGA TGTCGAAGAA GTGGTTCAGC
GCGCCGCTGC CGGCCGATCT GTAA
 
Protein sequence
MTRSILRPAR RAWLAALLLS PVLAVNAPAA HADTLDNIAK AGVLKVAVPE DYPPFGSVGA 
DMKPQGYDID TAALLAKSMN VKLELVPVNS ANRIPYLQTG KVDLVISSLG KTPDREKVID
FSTAYAPYYQ GVFGPADIKV SGPADLTGKT VGATRGALEE IGLTQMAPNA TIKRFEDNNA
TIAAFLSGQV QLIAAGNIVA AAILAKNPPR RPEPKFVIKN SPCFVGMNKN EPRLQQKVNA
AIAQAKQDGT LNTMSKKWFS APLPADL