| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0928 |
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| Symbol | ureC |
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| ID | 6282160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1041700 |
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| End bp | 1043406 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642620488 |
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| Product | urease subunit alpha |
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| Protein accession | YP_001894571 |
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| Protein GI | 187922929 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0804] Urea amidohydrolase (urease) alpha subunit |
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| TIGRFAM ID | [TIGR01792] urease, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTAC GCATTGGCCG CCGCGCATAC GCGGAAATGT TCGGCCCCAC CAGCGGCGAC
CGCGTGCGCC TCGCCGACAC CGAACTGCTG ATCGAAGTCG AGCGCGACTT CACCACCTAC
GGCGAAGAAG TGAAATTCGG CGGCGGCAAA GTGATTCGCG ACGGCATGGG CCAGTCACAA
CGCGTGCATG CCGAGGTGGT CGATACCGTC GTGACGAACG CCGTGATTCT CGATCACTGG
GGCATCGTCA AGGCCGACAT CGGCATCAAG GACGGCCGCA TCGCCGCGAT CGGCAAAGCG
GGCAACCCCG ACATCCAGCC GAACGTGACG ATCGCGATTG GCGCCTCCAC CGAAGTGATC
GCGGGCGAAG GCCTGATCGT GACGGCGGGC GGCATCGACA CGCATATTCA CTTCATCAGC
CCGCAGCAGA TCGAAGAGGC GCTTGCCAGC GGCGTGACCA CGATGCTCGG CGGCGGCACC
GGTCCGGCGA CCGGCACGAA CGCGACGACG TGCACGCCGG GGCCGTGGCA TCTCGAACGC
ATGCTGCAAG CGGCCGACGG TTATCCGATG AATCTCGGCT TTCTCGGCAA GGGCAATGTG
AGCCTGCCGC AGCCGGCGCT GGAGCAGATC GCCGCGGGCG CGATCGGTTT GAAGCTGCAT
GAGGACTGGG GCACGACGCC GGCCGCGATC GACAACTGCC TCTCAGTCGC CGACGATACC
GACACGCAGG TCGCGATTCA CACGGACACG CTGAACGAAG CCGGCTTCGT GGAAGCGACC
GTGGCCGCGT TCAAGGGCCG CACGATTCAC ACGTATCACA CGGAAGGCGC GGGCGGCGGC
CACGCACCCG ACATCATCAA GGTCTGCGGC GAAGCGAACG TGCTGCCCTC CTCGACCAAT
CCGACGCGTC CGTACACCGT CAACACGCTC GAAGAGCATC TCGACATGCT GATGGTGTGC
CATCACCTCG ACCCGTCGAT CGCGGAAGAC ATCGCGTTCG CCGAGTCGCG CATTCGCCGC
GAGACCATTG CCGCCGAAGA CATCCTGCAC GATCTCGGCG CGCTGTCGAT GCTGTCGTCG
GATTCGCAGG CCATGGGCCG CGTCGGCGAA GTGATCATCC GCACCTGGCA GACCGCGCAC
AAGATGAAGG TGCAACGCGG CGCGCTGCCT GAAGACAACG CGCGCCACGA CAACTTCCGT
GCGAAGCGCT ACGTTGCCAA GTACACGATC AACCCGGCGA TCACGCACGG CATCGCGCAC
GAAGTCGGCT CGATCGAGCC GGGCAAGTGG GCCGACCTGG TGTTCTGGGA GCCGGCGTTT
TTCGGCATCA AACCGTCGCT GATCCTCAAG GGCGGCATGA TCGCCATGGC GCAGATGGGC
GACCCCAACG CGTCGATTCC GACGCCGCAG CCGGTGCACT ATCGTGAGAT GTTCGCGACG
CGCGGCGGCG CCCTGGGACG CACGTCGCTG ACCTTCGTCT CGCAGATCGC CGCCGATGCG
GGCGTCGGCG AACGCTACGG CCTGAACAAG CGTATCGTGG CGGTCAGGAA CTGCCGTAAC
ATTTCGAAGG CAGACATGAT CCACAACGCG TGGCGCCCGG CGATCAGTGT CGATCCGGAA
ACCTATCAGG TGATTGCCGA CGGTCAGTTG CTGACCTGCG AACCGGCCAC CGTGCTGCCG
ATGGCGCAAC GCTACTTTCT GTTCTAG
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| Protein sequence | MTLRIGRRAY AEMFGPTSGD RVRLADTELL IEVERDFTTY GEEVKFGGGK VIRDGMGQSQ
RVHAEVVDTV VTNAVILDHW GIVKADIGIK DGRIAAIGKA GNPDIQPNVT IAIGASTEVI
AGEGLIVTAG GIDTHIHFIS PQQIEEALAS GVTTMLGGGT GPATGTNATT CTPGPWHLER
MLQAADGYPM NLGFLGKGNV SLPQPALEQI AAGAIGLKLH EDWGTTPAAI DNCLSVADDT
DTQVAIHTDT LNEAGFVEAT VAAFKGRTIH TYHTEGAGGG HAPDIIKVCG EANVLPSSTN
PTRPYTVNTL EEHLDMLMVC HHLDPSIAED IAFAESRIRR ETIAAEDILH DLGALSMLSS
DSQAMGRVGE VIIRTWQTAH KMKVQRGALP EDNARHDNFR AKRYVAKYTI NPAITHGIAH
EVGSIEPGKW ADLVFWEPAF FGIKPSLILK GGMIAMAQMG DPNASIPTPQ PVHYREMFAT
RGGALGRTSL TFVSQIAADA GVGERYGLNK RIVAVRNCRN ISKADMIHNA WRPAISVDPE
TYQVIADGQL LTCEPATVLP MAQRYFLF
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