Gene Bphyt_0912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0912 
Symbol 
ID6284016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1024175 
End bp1024909 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content62% 
IMG OID642620472 
ProductABC transporter related 
Protein accessionYP_001894555 
Protein GI187922913 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATCGA TCAGAAATCT GCATGCGGGC TACGGCAAAG TGAAAGTGCT GCACGGCATT 
TCAATCGATG TGCCGAAGGC GTCTGTGGTC ACGCTGATCG GCTCCAACGG CGCGGGCAAA
ACAACGACCA TGCGCGCGAT CTCCGGCATG ATCCGGCCGA GTGCCGGTGA GATTACGATG
GGCGTCGGCA CCGACGCAAA GCGCATCGAC GCGCTGGACT CACATCGCAT CGCGCGGCTC
GGGCTTGCGC ATTCGCCGGA AGGCCGGCGC GTGTTCGCGA CCATGAGCGT GACCGACAAC
CTGATACTCG GCGCGTTCCC GCGCCTGACT TCGGCGCGGC CGCGCGGAGA TGTGAAGGCC
GATCTGGAGC GGGCTATCGA GATGTTTCCG CGGCTCAAGG AACGACGCCA TCAACTGGCC
GGCACGCTTT CCGGCGGCGA GCAACAGATG CTGGCGATGG CGCGCGCGAT CATGATGAAC
CCGGATCTGG TCTTGCTCGA CGAACCGTCG ATGGGACTCG CGCCCATTCT GGTCGAAGAG
GTTTTCCGAA TCATCGGCAA TCTGAAGAGT CAGGGCGTCA CCATGTTGCT GGTCGAACAG
TTCGCCGCCG CGGCACTCAA TGTGGCCGAT TATGGCTACG TACTGGAGAA CGGCAGAATT
GCGGCGCACG GCCCCGCGAC GGAATTGCGC AACGATCCCT CGGTGAAGGC GGCGTACCTT
GGGGCGAGCC ACTGA
 
Protein sequence
MLSIRNLHAG YGKVKVLHGI SIDVPKASVV TLIGSNGAGK TTTMRAISGM IRPSAGEITM 
GVGTDAKRID ALDSHRIARL GLAHSPEGRR VFATMSVTDN LILGAFPRLT SARPRGDVKA
DLERAIEMFP RLKERRHQLA GTLSGGEQQM LAMARAIMMN PDLVLLDEPS MGLAPILVEE
VFRIIGNLKS QGVTMLLVEQ FAAAALNVAD YGYVLENGRI AAHGPATELR NDPSVKAAYL
GASH