Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0912 |
Symbol | |
ID | 6284016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 1024175 |
End bp | 1024909 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642620472 |
Product | ABC transporter related |
Protein accession | YP_001894555 |
Protein GI | 187922913 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTATCGA TCAGAAATCT GCATGCGGGC TACGGCAAAG TGAAAGTGCT GCACGGCATT TCAATCGATG TGCCGAAGGC GTCTGTGGTC ACGCTGATCG GCTCCAACGG CGCGGGCAAA ACAACGACCA TGCGCGCGAT CTCCGGCATG ATCCGGCCGA GTGCCGGTGA GATTACGATG GGCGTCGGCA CCGACGCAAA GCGCATCGAC GCGCTGGACT CACATCGCAT CGCGCGGCTC GGGCTTGCGC ATTCGCCGGA AGGCCGGCGC GTGTTCGCGA CCATGAGCGT GACCGACAAC CTGATACTCG GCGCGTTCCC GCGCCTGACT TCGGCGCGGC CGCGCGGAGA TGTGAAGGCC GATCTGGAGC GGGCTATCGA GATGTTTCCG CGGCTCAAGG AACGACGCCA TCAACTGGCC GGCACGCTTT CCGGCGGCGA GCAACAGATG CTGGCGATGG CGCGCGCGAT CATGATGAAC CCGGATCTGG TCTTGCTCGA CGAACCGTCG ATGGGACTCG CGCCCATTCT GGTCGAAGAG GTTTTCCGAA TCATCGGCAA TCTGAAGAGT CAGGGCGTCA CCATGTTGCT GGTCGAACAG TTCGCCGCCG CGGCACTCAA TGTGGCCGAT TATGGCTACG TACTGGAGAA CGGCAGAATT GCGGCGCACG GCCCCGCGAC GGAATTGCGC AACGATCCCT CGGTGAAGGC GGCGTACCTT GGGGCGAGCC ACTGA
|
Protein sequence | MLSIRNLHAG YGKVKVLHGI SIDVPKASVV TLIGSNGAGK TTTMRAISGM IRPSAGEITM GVGTDAKRID ALDSHRIARL GLAHSPEGRR VFATMSVTDN LILGAFPRLT SARPRGDVKA DLERAIEMFP RLKERRHQLA GTLSGGEQQM LAMARAIMMN PDLVLLDEPS MGLAPILVEE VFRIIGNLKS QGVTMLLVEQ FAAAALNVAD YGYVLENGRI AAHGPATELR NDPSVKAAYL GASH
|
| |