Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0907 |
Symbol | |
ID | 6283856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1017401 |
End bp | 1018549 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642620467 |
Product | glycosyl transferase family 9 |
Protein accession | YP_001894550 |
Protein GI | 187922908 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAACG AGCGCGGACA GAATTTTCTA AAGCGCGTCG ATCTTATTGT CGGTGGTACC TTGCTGTACA TAATAGGGGC CGTTCGAAAA AAGCGAAGCT TGCCGGCTGA ATGCCGAACG GCCGCGATTT TCGCATTCGC TGCCATTGGT GACTCGATTT TGTCATCAAT CATCATTTCC GAATTGAGGA AAGTAAAAGA TATTTCGAAG GTGGTTGTAT TCGCATCGCG AAGCAATGCG CGCATTTATG ATCTATTCGC TGGACTGGAC GAAGTTGTAG TGGTCCCTCT TACCAGCCCG TTGGCTGCGC TGCGGGAAAT AAGGAAACAT CAAGTCGATC TGTTGGTCGA CACATCGCAA TGGCCGCGAA TTTCTGCCTT GTTGTCGGCG TTCACGAAGG CGAAGTTCAC CATTGGCTTT AAGACCAGAG GACAGTTCCG CCACTATGCT TATGACGCGA GTGTCGAGCA TGATGAACGT CTGCACGAAC TGGATAATTT TAGAAGGCTG CTGCGGCCGC TAGGGGTTGA GTCGACAGAA TCCCCGCGAA TAACGAAAGT TATTGGTTCC GGTCGTTCGC CATTCGCCAT CGACGACGAC TATATTGTTT TTCATCCATG GGCCTCCGGG ACAAATTTCC CAATGCGCGA ATGGCCGGTG GAGTGCTGGC GCGATCTCGC GCTTAAGCTG ATTGATGGCG GGTACGCAAT TGTCATAACC GGCGGTCCGG AAGACGCGAG CCGTGCTCAG CAACTGGTCG ATCTGATCGC CAGCAAGAAG GTCATAAGCC TGGCGGCCAA GGTGAGTTTG ACTGAGGTAG CCGAAGTAGT CAGGCAGGCG AAATGCATAG TCTGCGTCAA CACCGGAATC ATGCATTTAT CCGCAATGCT GGATACCCCA ATGGTAAGCC TGCATGGTCC GACCAATCCT TTCCGGTGGG GCCCGGTAAA TAAAGAGCGT GGAGTCCTGG CGGTCGCGAG GCAAGACGGT GGCATGTTTC TGAGCCTCGG GTTCGAGTAC CCGAGAGATG CGCAGTATGT GATGGGGAAG ATAAGCGTCG CTTCTGTCGT CGACGTTCTG AGTGAAGTCT ATTCAATCAA TTTAGGCCAT CATGACAAGA AACCCGCCGG TGAAGCTTTC GCCTCCTGA
|
Protein sequence | MKNERGQNFL KRVDLIVGGT LLYIIGAVRK KRSLPAECRT AAIFAFAAIG DSILSSIIIS ELRKVKDISK VVVFASRSNA RIYDLFAGLD EVVVVPLTSP LAALREIRKH QVDLLVDTSQ WPRISALLSA FTKAKFTIGF KTRGQFRHYA YDASVEHDER LHELDNFRRL LRPLGVESTE SPRITKVIGS GRSPFAIDDD YIVFHPWASG TNFPMREWPV ECWRDLALKL IDGGYAIVIT GGPEDASRAQ QLVDLIASKK VISLAAKVSL TEVAEVVRQA KCIVCVNTGI MHLSAMLDTP MVSLHGPTNP FRWGPVNKER GVLAVARQDG GMFLSLGFEY PRDAQYVMGK ISVASVVDVL SEVYSINLGH HDKKPAGEAF AS
|
| |