Gene Bphyt_0905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0905 
Symbol 
ID6283854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1015206 
End bp1015937 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content59% 
IMG OID642620466 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_001894549 
Protein GI187922907 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAATC AGCTGTGCCG CCGTGGTAAC CGTCTGCTAG AGGCACTCAC AACGCAGGAA 
TGGGAGGCGT TAGCTCCTCA TCTTGAACTC GTCGAGTTGA CAACAGGTCA ACTGCTGTCG
AAATCCGGTG AACTCATACG CACCGTCTAT TTTCCTGTCA CGGCCATCGT GTCTCTGCTG
CAGACAATGG AAAACGGCAG TTCGGTGGAA ATCGCCGCGA TCGGAAGGGA TGGGACGACG
GGCGTCCCCA TTCTGACAGG CGGCGACACC ATGCCCGCCA GTGTGCAGGC GCAATGCGGG
GGGTTCGCCC ATCGAATAAG CGCAAACGCG CTGCGCGAAG CATTGAGCGA CTGCGCGTCC
CTACGCTCGC TGATGCTGCT TTACATGCAG GCGCTGCTCA CACAGGTCGC ACAAACTGCG
GCGTGCAACA GGCTGCATCG AATCGACGAG CAACTGTGCC GGTGGCTGCT GGTCGACATC
GACCGTTCGG GAACGAGCGA TTTGCAGGTG ACACACCAAA TGATTGCCGA CATGCTCGGT
GTGCGCCGCG AAGGGGTGAC TGAGGCGTCC GGCAAGCTTA GCGCAGCCGA CCTCATTCAT
CACAGTCGTG GCCGTGTTCG CATCCTGGAT AGAACCGGAC TTGAGGCACG GGCATGCGAA
TGCTATGGGA TCGTCAAATG TGAATTCGAC CGCTTATTGC CGCGCCTGAG TGCGCTGGAA
GCTACGCGCT AG
 
Protein sequence
MTNQLCRRGN RLLEALTTQE WEALAPHLEL VELTTGQLLS KSGELIRTVY FPVTAIVSLL 
QTMENGSSVE IAAIGRDGTT GVPILTGGDT MPASVQAQCG GFAHRISANA LREALSDCAS
LRSLMLLYMQ ALLTQVAQTA ACNRLHRIDE QLCRWLLVDI DRSGTSDLQV THQMIADMLG
VRREGVTEAS GKLSAADLIH HSRGRVRILD RTGLEARACE CYGIVKCEFD RLLPRLSALE
ATR