Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0901 |
Symbol | |
ID | 6283765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1008589 |
End bp | 1009620 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642620462 |
Product | glycosyl transferase family 4 |
Protein accession | YP_001894545 |
Protein GI | 187922903 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGATGT CCCCTTCCAC GATGCCGGGC TGGACGAGCG TGATCCTGAT CGCGCTCGGC TCCGCTTGCG CCTGCGCGGC GATCCTGTGG ACGCTGCTCA GGACCGGCCT CGCGTGGCGT CTGGCCACCG ACATTCCCAA CGACCGCTCG TTGCACACGC GGCCCACGCC GCGGGTCGGC GGCTGGGGCA TCGTTCCGGT GGTGATCGTG GCAACGCTGA TCGTCGCGCC GCATCTCTGG CTTGCCGCGC TGTGCGCTGC GGTGCTGGCG GCGGTCTCGC AGATCGACGA CCGGCGCGGA CTGCCCGCGC GGGTCAGGTT CGCGGCGCAT CTCGCTGCGG TGGCGATCTT CGTCTGGGCG CATCCCGCGC ACGCGCCGCT TTGGCTGCTG GCGGCCTTGT CGTTTTTACT GCTCTGGCTG GTCAATCTTT ACAATTTTAT GGACGGCGCG GACGGCCTGG CCGGCGGCAT GACGCTGTTC GGCTTCGCGG GCTACGCCGC CGGGGCCGCG CTCACCGCGC ATCCGTCGCC GGAGCTCACG TGGGCGTCGG CCGCCGTGGC GGGCGCCGCC GCGGGCTTTC TGGTCTTCAA CTTCCACCCG GCGAAAATCT TCCTCGGCGA CGCCGGGTCG ATTCCGCTCG GCTTTCTGGC AGGCGCTTTC GGCTATTGGG GCTGGAGCGA GGGCGTCTGG CCGATCTGGT TTCCCGCGCT GGTGTTTTCG CCGTTCATCG GCGACGCGTC GGTCACGCTG CTGCGGCGGC TCCTGCGCGG CGAGAAAATC TGGCAGGCAC ACTGCGAGCA CTATTATCAG CGCATGGTTC AATACGGCCT CGGGCATTCG AAAACTGCCA TCCTATGGTA TGCAGTAATG GCGGCTGGTA TAGTACTTGC TGTCGTGTTG CTTGGCTGGC CTTCAGCCTT TCAATGGTGT AGCGTGGGCG CATGGGTGAT CGTGCTGGTA TTGATTGGTA TCGGAGTCGA TTCACGCTGG CGTCGATTCC GGATAGCAGA TTCCGAACAA CCTGAGGTGT GA
|
Protein sequence | MLMSPSTMPG WTSVILIALG SACACAAILW TLLRTGLAWR LATDIPNDRS LHTRPTPRVG GWGIVPVVIV ATLIVAPHLW LAALCAAVLA AVSQIDDRRG LPARVRFAAH LAAVAIFVWA HPAHAPLWLL AALSFLLLWL VNLYNFMDGA DGLAGGMTLF GFAGYAAGAA LTAHPSPELT WASAAVAGAA AGFLVFNFHP AKIFLGDAGS IPLGFLAGAF GYWGWSEGVW PIWFPALVFS PFIGDASVTL LRRLLRGEKI WQAHCEHYYQ RMVQYGLGHS KTAILWYAVM AAGIVLAVVL LGWPSAFQWC SVGAWVIVLV LIGIGVDSRW RRFRIADSEQ PEV
|
| |