Gene Bphyt_0898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0898 
Symbol 
ID6283762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1004981 
End bp1006405 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content62% 
IMG OID642620459 
Producthypothetical protein 
Protein accessionYP_001894542 
Protein GI187922900 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.897817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGCA GACCACTCGT CGTCGACCTC GATGGCACAT TGATTCGCTC AGACATCCTG 
ATCGAGTCTG GATTTGCCTA TCTGAAGGCA GCCCCGCAAC GCTTTTATGA GCCGCTGCTG
TGGCTCGCGC GCGGCGGCAA GCCGGGTTTG AAAGCGCGCC TCGCCGACGC GACGAACGTT
GACGTGGCCG TGCTGCCCTA CGACGCCACG GTCCTGCAAT GGCTGAAAGT CGAGCGCGAC
GCCGGCCGCT CGCTGGTGCT GGCCACGGCA AGCCACGAAC GTTACGCGCA GGCCATCTCC
GCCCATCTCG GCATTTTCGA CAGGACGTTC GCAACGAACG GCAGCATCAA CCTGTCCGCT
CACAACAAGC GCGATACGCT GGTCGCCGAG TACGGCGAAA AAGGCTTCGA CTACGCCGGC
AATTCGCACG ACGACCTGGC AGTCTGGCAA TCCGCCGACC GCGCGTATGT GGTGAATCCG
TCCAATGGCG TGGAACGCGC CGCGCGCAAG ATCGGCAATG TGGAGCGGGT GATCGAATCG
CGTCCACCCG CCGTCAAGAC ATGGGCCAAA TCCTTGCGCC TGCACCAGTG GCTGAAGAAC
CTTTTGATCT TCTTGCCGCT GCTGGCCGCA CATAAGCTGT CCTCGCCCGA ACTGACTCTC
GCTGCGGTGT TGGCGTTTCT CACGTTCGGC TTGTGCGCCT CGAGTGTCTA TCTGCTCAAC
GACCTGCTCG ATCTCGAAGA CGATCGTCAC CACCCGGTCA AACGCAAACG TCCGCTTGCT
TCGGGCGCTC TGCCGCTCAC ATGGGGACTT GCGCTCTTTC CTGTCTTGCT GGTGGTCGCG
TTCGTCACGG CGTGGCTTTT CCTGCCCTGG CAATTCTCCG CGGCGCTGTT CGGCTATTAC
GTACTGACGC TCGCGTACTC CACGTTTCTG AAACGCCAGG TGATGGTCGA CGTGGTGGTG
CTGGCCATGC TGTACACGAT GCGCATCATC GCCGGAACGG CAGCGGTCGA CGCGCAACTG
ACCTTCTGGC TGCTCGCCTT TTCGATGTTC ATCTTCCTGA GCCTCGCGCT CGTCAAGCGC
TATGCCGAAC TGCACTCGAT GAAAGCGCGC GGTCTCGTCA AGACGCGCGG GCGCGGCTAT
GTGGCGAGCG ACCTGTCGCT CATCTCGTCG CTTGGAACCT CGTCCGGCTA TCTGGCCGTG
CTCGTGCTTG CGCTCTATAT CCAGGACGCG AAAACCGCCG GCATGTACCA CCACCCGCAA
GTCATCTGGC TCGCGTGTCC GCTGCTGCTT TACTGGGTAA GCCGCACCTG GATCATTGCG
CATCGCGGTC TGATGCACGA CGATCCGATC GTGTTCGCGG CGCGCGACCG GGTCAGCCTC
GCAGTCGTCG TGCTGTGCGG CCTGATTTTC TGGGCCGCGA TCTAG
 
Protein sequence
MRSRPLVVDL DGTLIRSDIL IESGFAYLKA APQRFYEPLL WLARGGKPGL KARLADATNV 
DVAVLPYDAT VLQWLKVERD AGRSLVLATA SHERYAQAIS AHLGIFDRTF ATNGSINLSA
HNKRDTLVAE YGEKGFDYAG NSHDDLAVWQ SADRAYVVNP SNGVERAARK IGNVERVIES
RPPAVKTWAK SLRLHQWLKN LLIFLPLLAA HKLSSPELTL AAVLAFLTFG LCASSVYLLN
DLLDLEDDRH HPVKRKRPLA SGALPLTWGL ALFPVLLVVA FVTAWLFLPW QFSAALFGYY
VLTLAYSTFL KRQVMVDVVV LAMLYTMRII AGTAAVDAQL TFWLLAFSMF IFLSLALVKR
YAELHSMKAR GLVKTRGRGY VASDLSLISS LGTSSGYLAV LVLALYIQDA KTAGMYHHPQ
VIWLACPLLL YWVSRTWIIA HRGLMHDDPI VFAARDRVSL AVVVLCGLIF WAAI