Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0886 |
Symbol | |
ID | 6282129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 987522 |
End bp | 989003 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642620447 |
Product | ABC transporter related |
Protein accession | YP_001894530 |
Protein GI | 187922888 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTCTTGG ACGATATAGC TATCCACGTT CGCGATTTGA GCAAGCGTTA CGAACTTTAT GCGAAGCCTC ACCATCGGCT GGCGCAGATG CTGCTTCGCG GGCGTCGGCA GTTTTTCGGC GAATTCTGGC CGCTGCGCAA CATCTCCTTC AACGTTAAGA AGGGCGAAGC AGTGGGTATC GTGGGCCGTA ACGGCGCCGG TAAATCGACA CTGCTGCAGA TCATCGCCGG CGTCCTGTCG CCTACTCAGG GCGACGTGGA AGTCCATGGT CGGGTCGCGG CCCTGCTGGA ATTGGGCAGC GGTTTCAACC CGGAGTTTAC CGGCCGCGAG AACGCTTATC TGAACGGCTC GATTCTTGGC CTGACGCGCA AGGAAATGGA CGCGGCCATG CCGGAGATCA TCCGCTTCGC GGCGATCGGC GATTTCTTCG ATCAACCCGT CAAGCACTAC TCGAGCGGGA TGATGGTGCG CGTTGCCTTC GCGGTGCAGG TGCAGTTGAA CCCGGACGTG CTGATCGTCG ACGAGGCACT GGCCGTTGGC GACGCGCTGT TCCAGAAGCG CTGCTATCAG CGCATTCGTC AGTTGCGGGA TCGCGGCGTC GCGATTCTGT TCGTGTCGCA CGACATCGAG TCGGTTCGAA CCTTCACCGA CCGCGCGATT TTGCTCCATC ACGGCGAGGT CATGGCGGCG GGGCCGTCCG GCGAAGTCGT GCTGGCCTAT CGCAAGCTGT TGCACGACGA GGAAAACCTC GCCAAGCAGA AGGAGATCGC CGAGCACAAG CAGGCGCTCA AAGCGAACAC CGCACCGGCG GTCGCGGCGC CCGTCGAATC GCCGCAACTG ACGGCGCCCG CCGCGACGGC CGAACCGCTC GAGGCCGCTG CAGCTGAAGG CCATCTCGGG CAAGCCGTGT CGAACGTCTC GGACGCAGCG GATCAGATGG AAACCGAGGC GCGCAACGAA GGCGGCAAGT TCGAATTCGG CAGCCTCGAG GCGCTGATTA CAGACGTCTC CGTGCTCGAC GGCGCGGGCG AGCAGTGCAC CACGTTCTAT ACCGGCGATA CAGTCAAGAT CGTGGTGAAA TTCTCGATCC GTGAGGACAT GGACAAGCTC TATGTCAACC TGCGCATCCG CAACAAGGAA GGCATCAAGA TGTACTCCTG GGGGACGTTC AACCAGGACG CCGAACTGAT CGCCGGCAAG CAGGACGGCT TCGTTTTCTG GAACCGCAAA TTCCGCGCGG GCGAAGAGCA TTCCGTCGTC TTCACGATGG ACTCCTGCGC GCTGGGCGAA AATTTCTACG AAGTGCAGGC TTCGCTGATC CACCAGGAGT CGATGAATTT CTCCGATCAG GCGATCTTGC ACTGGATCGA CGAGGCCGCA TTCTTCATGG TCCGCGCGCG CGTCGACACG CATTTCTTCG GCGGCGTGTG CGATCTGCAC ATGCGCGCCG AACTTGAAGC ACCTACCGGC GAAGCCTCGT AA
|
Protein sequence | MVLDDIAIHV RDLSKRYELY AKPHHRLAQM LLRGRRQFFG EFWPLRNISF NVKKGEAVGI VGRNGAGKST LLQIIAGVLS PTQGDVEVHG RVAALLELGS GFNPEFTGRE NAYLNGSILG LTRKEMDAAM PEIIRFAAIG DFFDQPVKHY SSGMMVRVAF AVQVQLNPDV LIVDEALAVG DALFQKRCYQ RIRQLRDRGV AILFVSHDIE SVRTFTDRAI LLHHGEVMAA GPSGEVVLAY RKLLHDEENL AKQKEIAEHK QALKANTAPA VAAPVESPQL TAPAATAEPL EAAAAEGHLG QAVSNVSDAA DQMETEARNE GGKFEFGSLE ALITDVSVLD GAGEQCTTFY TGDTVKIVVK FSIREDMDKL YVNLRIRNKE GIKMYSWGTF NQDAELIAGK QDGFVFWNRK FRAGEEHSVV FTMDSCALGE NFYEVQASLI HQESMNFSDQ AILHWIDEAA FFMVRARVDT HFFGGVCDLH MRAELEAPTG EAS
|
| |