Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0885 |
Symbol | |
ID | 6282128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 984985 |
End bp | 987438 |
Gene Length | 2454 bp |
Protein Length | 817 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642620446 |
Product | glycosyl transferase family 2 |
Protein accession | YP_001894529 |
Protein GI | 187922887 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAGCA AGAAGGCGCG TGTTGGCATT GTTATCGTAA CCTTCAATTC AGCGGAGGTG TTCGCGCTTG CGATCGAGAG TCTGATCAAG ACCCGAAGCG ATACGGAATT CGTGGTGGCC GCGATCGATA ACGCATCCCG GCCGGCTGAG CGTGCCGCCG TGCAGGCCAC GTTCGAACAC GCTGTCGCCC AGCAAGGCTT GCAAGGCAAA TTCTTTCAGC AAGACAAGAA CCTCGGCTTT TCCGGTGGCA ATAACATCGG GATCCAGTAC TGCCTGGCGG ATCCGACGAT CACGCATATC TGCCTGCTCA ATAGCGACGT CATCGTCACC GATCATTGGC TCGACTATCT CGTCGCGGCG GATAAGGATG CGATCGGTCC GCTGACCAAC GCGTCGAACA ATGAGCAGGG CATTCCCATT CCCTACCATC TCGGCGACCG CAACCGACTG GGCGAAGGCA GCGCCGCGCT CGATATGCCG GTGCTCGCGG AGTTTGCGAT TCGCCGGCGT GAAGGCTGGC TCGGCTTGAC CGTCGACAGC GACTTCCTGA GTTACTACTG CGTGCTGTTT TCGCGCGAGT TGCTCGAACG CGTCGGCGCG CTCGACGAGC GCTTCTTTCC AGGCGCATAC GAAGACGACG ACCACTGCGT CCGCATTTTG CAAGGCGGAT TCAAGATGCA CGTGGCGCGC GATGTATATA TTCACCATTG GGGCTCGGCG TCGTTCGGCA AGCTCGACGT CGCCGAGGCA CAGGGATTCG CCGCGCAGAA TCGCGCGCGC TTCGAAGAGA AGCATGGCCG CGCGTGGCAG GACCGCACGC GCCTGTCCGT GACCGCGTGG ATGCAGGATT CGTTGTTTGC GATTGCCTCG CCGAAACGGT TTCCGATTCA CCTCGAAACG CATCACCTTT ACGCGCGCCA GATGCGCACG CTGGTGGAAG GCCTCGAGGC CTATTCGAAG CATCTGAATG GCGAAATCGC GCGCTGGCAG GCTGAGCAGA TGAACGATCT GCGTTCGCTG GTGATGGGGC GTTATATCGA CGAACCCGTC TCGGCGGCGT CGTTGTTGCC CGTGATCAAC GGCATCGATG CGGACATCGA GCAATATTTG TTGACGGACG GCGAAGGCGT GTCGCCGGAA GTCGTGCAGC GCATGAAGGT TCGATTCGAA TCGTTCGCTA ATGAACTGGA TGCGCTAGTC GCCAGGACGT CGCGTACGGC TCGCGAGCTG ACCGCGATGC AAGCCGCCAG GTCGCAGGAC AAGCCGCTCA GCTTCAAACA GCGCGTGACC AACCGGCTGG CTCGCGCAGC GCGATTCCCC ACCTCGAAGG TGAGCCGCCT CGTGCGCGGA TACGAATTGT TGCAACTGCT GCGGCATGGC GACGGAATTC TTTTCTTCGC TCCGTATCCG ACCAAGGAGC GTGAGCGCGA CGGCTATTTT CAGCGTGTCA AGGCGATCGA TTCGCTGTTT CCCTCGAAAC ACAGGGTGTA TTGCGATGTG CGCGGTCATC CGGAGGCCAA GCCTTTTATC GAAAGGGCGG CGCATAACGC CTGGGTGCTG AACATTTCCC TGGCGTCTCG CAATCAGCAA CGGCTCGTCG CGCTATTGGC GCGCCGCTTC AAACGCGTCT ACTTTCACAG CGTTTTGCGC ATGCCGAATG CGGCAGCGGA AGCGGCGCTT CGCGCGCCGG GCCTGAAATG GGTGCTTGAT GTGCACGGCG TCGTGCCCGA AGAGTTCCGG ATGCACAATG ATTTCTTCTC CGCGCGCATT CATGACGATT GCGAGCGCAT GGCGGTGGAG AATGCGAGCC GCGTAATTGT CGTGTCGCAG GCCATGGGCA ACTATCTCGC GCACAAGTAC CGCGAGCTGT TGCGCGCGAA AGTGATCGTG TTGCCGATCT TCGCATTGGA AGAAGGAAGC GAAGGAGCGC GGCCCTACAA GGATGGCCGG CCCACGGTCA TTTATGCCGG CGGCACGCAG AAGTGGCAAA ACGTACCCGC CATGATGAAC GTGGTTGCGC GAGCACTGGA CCACGCCGAC TGGTGGATGT ACACGCCGGA TGTCGAGGTG ATGAGAAACG CGGCGGCGCC CGAGGTTCAA AACCACCCGA ACTTCCATGT GGCCAGCGCG ACGCGTGCCG AGCTCAACGA GGTGTACCAG CAGTGCCATT TCGGCTTCAT TCTGCGCGAC GACATGGTGG TGAACCACGT GTCCTGTCCG ACCAAGCTGA TCGAGTATCT GGCGTTCGGC ATCGTGCCCA TCGTGGACAC GCCCAACATC GGCGACTTCA ACACGTACGG CATGCGTTAC GTGAGTGTGG AGGATTTTGC CAAGGGGCGG ATTCCTGACG CGGCCACGCG CATGGAGATG GCCGCGCACA ATCGGGCCAT CTGCGAGCGG CTGGTCGAGC AGAAGGCCAC GGGCGAGAAG GAACTCATCG AGGCGCTGAC CTAG
|
Protein sequence | MNSKKARVGI VIVTFNSAEV FALAIESLIK TRSDTEFVVA AIDNASRPAE RAAVQATFEH AVAQQGLQGK FFQQDKNLGF SGGNNIGIQY CLADPTITHI CLLNSDVIVT DHWLDYLVAA DKDAIGPLTN ASNNEQGIPI PYHLGDRNRL GEGSAALDMP VLAEFAIRRR EGWLGLTVDS DFLSYYCVLF SRELLERVGA LDERFFPGAY EDDDHCVRIL QGGFKMHVAR DVYIHHWGSA SFGKLDVAEA QGFAAQNRAR FEEKHGRAWQ DRTRLSVTAW MQDSLFAIAS PKRFPIHLET HHLYARQMRT LVEGLEAYSK HLNGEIARWQ AEQMNDLRSL VMGRYIDEPV SAASLLPVIN GIDADIEQYL LTDGEGVSPE VVQRMKVRFE SFANELDALV ARTSRTAREL TAMQAARSQD KPLSFKQRVT NRLARAARFP TSKVSRLVRG YELLQLLRHG DGILFFAPYP TKERERDGYF QRVKAIDSLF PSKHRVYCDV RGHPEAKPFI ERAAHNAWVL NISLASRNQQ RLVALLARRF KRVYFHSVLR MPNAAAEAAL RAPGLKWVLD VHGVVPEEFR MHNDFFSARI HDDCERMAVE NASRVIVVSQ AMGNYLAHKY RELLRAKVIV LPIFALEEGS EGARPYKDGR PTVIYAGGTQ KWQNVPAMMN VVARALDHAD WWMYTPDVEV MRNAAAPEVQ NHPNFHVASA TRAELNEVYQ QCHFGFILRD DMVVNHVSCP TKLIEYLAFG IVPIVDTPNI GDFNTYGMRY VSVEDFAKGR IPDAATRMEM AAHNRAICER LVEQKATGEK ELIEALT
|
| |