Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0880 |
Symbol | |
ID | 6282238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 979311 |
End bp | 979862 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642620441 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_001894524 |
Protein GI | 187922882 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATCC AAGTAACCGC TACCACGCTG CCTGAAGTCA AGATCATCGA GCCGAAAGTG TTCGGCGATG CGAGAGGCTT TTTCTTCGAG AGCTTCAATG CGAAGGAATT CGCCGAGCAG GTCGAGCCGG GCGTCGAATT CGTGCAGGAC AACCATTCGC GCTCCGCGAA GGGCGTGCTG CGTGGGCTGC ACTACCAGGT CCAGAATGCG CAGGGCAAGC TCGTGCGTGT CGTCGAAGGT GAAGTGTTCG ACGTCGCGGT GGACATCCGC AAGAGTTCGC CGAATTTCGG CAAGTGGGCG GGCGTGGTTC TGTCGGTCGA CAACCATCGG CAGTTGTGGG TGCCGCCCGG TTTCGCGCAC GGTTTCGTGG TGCTGTCCGA GTCCGCGCAG TTCCTCTACA AGACCACCGA CTACTGGTAT CCCGAGCACG AACGCAGCAT CGTCTGGAAC GATCCGGCGA TCGGCATCGA GTGGCCGATC GACGAAGAGC CGCTGCTGGC GGCGAAAGAC GCGGCGGCCA AGCTTTTGGC CGATGCCGAC GTCTTCGCTT AA
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Protein sequence | MAIQVTATTL PEVKIIEPKV FGDARGFFFE SFNAKEFAEQ VEPGVEFVQD NHSRSAKGVL RGLHYQVQNA QGKLVRVVEG EVFDVAVDIR KSSPNFGKWA GVVLSVDNHR QLWVPPGFAH GFVVLSESAQ FLYKTTDYWY PEHERSIVWN DPAIGIEWPI DEEPLLAAKD AAAKLLADAD VFA
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