| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0880 |
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| Symbol | |
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| ID | 6282238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 979311 |
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| End bp | 979862 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642620441 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001894524 |
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| Protein GI | 187922882 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCC AAGTAACCGC TACCACGCTG CCTGAAGTCA AGATCATCGA GCCGAAAGTG
TTCGGCGATG CGAGAGGCTT TTTCTTCGAG AGCTTCAATG CGAAGGAATT CGCCGAGCAG
GTCGAGCCGG GCGTCGAATT CGTGCAGGAC AACCATTCGC GCTCCGCGAA GGGCGTGCTG
CGTGGGCTGC ACTACCAGGT CCAGAATGCG CAGGGCAAGC TCGTGCGTGT CGTCGAAGGT
GAAGTGTTCG ACGTCGCGGT GGACATCCGC AAGAGTTCGC CGAATTTCGG CAAGTGGGCG
GGCGTGGTTC TGTCGGTCGA CAACCATCGG CAGTTGTGGG TGCCGCCCGG TTTCGCGCAC
GGTTTCGTGG TGCTGTCCGA GTCCGCGCAG TTCCTCTACA AGACCACCGA CTACTGGTAT
CCCGAGCACG AACGCAGCAT CGTCTGGAAC GATCCGGCGA TCGGCATCGA GTGGCCGATC
GACGAAGAGC CGCTGCTGGC GGCGAAAGAC GCGGCGGCCA AGCTTTTGGC CGATGCCGAC
GTCTTCGCTT AA
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| Protein sequence | MAIQVTATTL PEVKIIEPKV FGDARGFFFE SFNAKEFAEQ VEPGVEFVQD NHSRSAKGVL
RGLHYQVQNA QGKLVRVVEG EVFDVAVDIR KSSPNFGKWA GVVLSVDNHR QLWVPPGFAH
GFVVLSESAQ FLYKTTDYWY PEHERSIVWN DPAIGIEWPI DEEPLLAAKD AAAKLLADAD
VFA
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