Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0873 |
Symbol | |
ID | 6283918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 971346 |
End bp | 972623 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642620434 |
Product | putative transposase IS891/IS1136/IS1341 family |
Protein accession | YP_001894517 |
Protein GI | 187922875 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.258766 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGCC GCAAAGTCAC CTTCAAGCTT TATCCCAGCG CTACGCAGGC CGAGCGCCTG ACGGGCTGGA TTCGCTTGCA CTGTGAGCTA TACAACGCGG CTCTCGAGGA GCGAATCGAC GCCTATCGGA AGACCGACAA GTCGATCAGC TATTACGAGC AGCAAAACGT GTTGCCGGCG ATCAAAGCCG ATCGTCCGGA GTTCGTCGAA CTAGGCAGTC ACGCACTCCA GCAGACACTG CGCAGGCTGG ATCTGGCCTT TCAGGCGTTC TTTCGCCGCG TCAAGGCTGG GCAGACGCCG GGCTTTCCGC GCTTCAAAGC CAGTAAGCGG TTTTCTGGCT TCTGCTATCC GGACCCGGCC GGCTGGAAAC TCATGCAGTC CGGCACGCGC GGCGCAACGA TTCGCATAGG CAGCGGCAAG GGCGCCATGT CGATCCGCGC ACGCGGCCGG CATCGCTTCG GCGACGGCGC GAAGCCCAAC GATCTCACGA TCATGCGCAA GAACGGCGAC TGGTTCGCGT CTGTCACGTT GCGTGTATCG GCGGCGGCTT GCGCTCGGAT GCGGAATGGT GAAGACCATC GCGGCGTTGA CTTCGGCATC AACGATTGGG CCACGTTCGA CAACGGCGAG ACGATCGCCA ATCCGCGATT CATCCGCAGC AAGCTGTCAT GGATGGCGGA TCTGCAGCGA CAGCAGGCGA GGAAGAAGCG CGGATCTATC CGCTATAAGC GGCTTGGCAG GCACGTAGCG AAGCTTCACG AGCGGATCGG TAACCTGCGC CGTGAGTTCC TGCACACGGC GACCTCGCGC ATGGTCGCGT CGTGCGCAGT GCTCGCCACG GAAGAATTGC GCACGCAGAA CATGAGCCGT TCGGCCGGGG GCACGCAGGA CAAACCCGGC CGGGTTGTCA GGCAAAAGGC TGGACTCAAT CGCGAGATCC TGTCGGCCGG ATTGGGCATG GCGCACAACA TGCTGGCGTA CAAAGCGGTA GAGGCTGGTA CGCGACTGCA TGTGTCGAAC ACACGCCAGT TAAAACCATC GCAGCGCTGC GCCGCATGCT GGGAGATCGT GCCCAAAACG CTCGCGCAAC GTGTGCATGA GTGTCCGCAT TGCGGCCACA CGGCACCACG CGATCAAAAT GCAGCGGCGG TCGTGCTGAT CGACGCGCAC ACGCCTGGGA CGGGCGTGGC GGCGAGACCC AAACCTCTGT CGCGGCAACG CGCCAAGTCA AAGTCCGGGA CCCGTGAAAC CCCTGATACA GTGTCGCAAG ACGCTTAG
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Protein sequence | MERRKVTFKL YPSATQAERL TGWIRLHCEL YNAALEERID AYRKTDKSIS YYEQQNVLPA IKADRPEFVE LGSHALQQTL RRLDLAFQAF FRRVKAGQTP GFPRFKASKR FSGFCYPDPA GWKLMQSGTR GATIRIGSGK GAMSIRARGR HRFGDGAKPN DLTIMRKNGD WFASVTLRVS AAACARMRNG EDHRGVDFGI NDWATFDNGE TIANPRFIRS KLSWMADLQR QQARKKRGSI RYKRLGRHVA KLHERIGNLR REFLHTATSR MVASCAVLAT EELRTQNMSR SAGGTQDKPG RVVRQKAGLN REILSAGLGM AHNMLAYKAV EAGTRLHVSN TRQLKPSQRC AACWEIVPKT LAQRVHECPH CGHTAPRDQN AAAVVLIDAH TPGTGVAARP KPLSRQRAKS KSGTRETPDT VSQDA
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