Gene Bphyt_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0873 
Symbol 
ID6283918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp971346 
End bp972623 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content62% 
IMG OID642620434 
Productputative transposase IS891/IS1136/IS1341 family 
Protein accessionYP_001894517 
Protein GI187922875 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.258766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGCC GCAAAGTCAC CTTCAAGCTT TATCCCAGCG CTACGCAGGC CGAGCGCCTG 
ACGGGCTGGA TTCGCTTGCA CTGTGAGCTA TACAACGCGG CTCTCGAGGA GCGAATCGAC
GCCTATCGGA AGACCGACAA GTCGATCAGC TATTACGAGC AGCAAAACGT GTTGCCGGCG
ATCAAAGCCG ATCGTCCGGA GTTCGTCGAA CTAGGCAGTC ACGCACTCCA GCAGACACTG
CGCAGGCTGG ATCTGGCCTT TCAGGCGTTC TTTCGCCGCG TCAAGGCTGG GCAGACGCCG
GGCTTTCCGC GCTTCAAAGC CAGTAAGCGG TTTTCTGGCT TCTGCTATCC GGACCCGGCC
GGCTGGAAAC TCATGCAGTC CGGCACGCGC GGCGCAACGA TTCGCATAGG CAGCGGCAAG
GGCGCCATGT CGATCCGCGC ACGCGGCCGG CATCGCTTCG GCGACGGCGC GAAGCCCAAC
GATCTCACGA TCATGCGCAA GAACGGCGAC TGGTTCGCGT CTGTCACGTT GCGTGTATCG
GCGGCGGCTT GCGCTCGGAT GCGGAATGGT GAAGACCATC GCGGCGTTGA CTTCGGCATC
AACGATTGGG CCACGTTCGA CAACGGCGAG ACGATCGCCA ATCCGCGATT CATCCGCAGC
AAGCTGTCAT GGATGGCGGA TCTGCAGCGA CAGCAGGCGA GGAAGAAGCG CGGATCTATC
CGCTATAAGC GGCTTGGCAG GCACGTAGCG AAGCTTCACG AGCGGATCGG TAACCTGCGC
CGTGAGTTCC TGCACACGGC GACCTCGCGC ATGGTCGCGT CGTGCGCAGT GCTCGCCACG
GAAGAATTGC GCACGCAGAA CATGAGCCGT TCGGCCGGGG GCACGCAGGA CAAACCCGGC
CGGGTTGTCA GGCAAAAGGC TGGACTCAAT CGCGAGATCC TGTCGGCCGG ATTGGGCATG
GCGCACAACA TGCTGGCGTA CAAAGCGGTA GAGGCTGGTA CGCGACTGCA TGTGTCGAAC
ACACGCCAGT TAAAACCATC GCAGCGCTGC GCCGCATGCT GGGAGATCGT GCCCAAAACG
CTCGCGCAAC GTGTGCATGA GTGTCCGCAT TGCGGCCACA CGGCACCACG CGATCAAAAT
GCAGCGGCGG TCGTGCTGAT CGACGCGCAC ACGCCTGGGA CGGGCGTGGC GGCGAGACCC
AAACCTCTGT CGCGGCAACG CGCCAAGTCA AAGTCCGGGA CCCGTGAAAC CCCTGATACA
GTGTCGCAAG ACGCTTAG
 
Protein sequence
MERRKVTFKL YPSATQAERL TGWIRLHCEL YNAALEERID AYRKTDKSIS YYEQQNVLPA 
IKADRPEFVE LGSHALQQTL RRLDLAFQAF FRRVKAGQTP GFPRFKASKR FSGFCYPDPA
GWKLMQSGTR GATIRIGSGK GAMSIRARGR HRFGDGAKPN DLTIMRKNGD WFASVTLRVS
AAACARMRNG EDHRGVDFGI NDWATFDNGE TIANPRFIRS KLSWMADLQR QQARKKRGSI
RYKRLGRHVA KLHERIGNLR REFLHTATSR MVASCAVLAT EELRTQNMSR SAGGTQDKPG
RVVRQKAGLN REILSAGLGM AHNMLAYKAV EAGTRLHVSN TRQLKPSQRC AACWEIVPKT
LAQRVHECPH CGHTAPRDQN AAAVVLIDAH TPGTGVAARP KPLSRQRAKS KSGTRETPDT
VSQDA