| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0871 |
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| Symbol | pyrB |
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| ID | 6281936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 969726 |
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| End bp | 970751 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642620433 |
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| Product | aspartate carbamoyltransferase catalytic subunit |
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| Protein accession | YP_001894516 |
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| Protein GI | 187922874 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.341449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCG CCACCCAGGC TCCCAAGGAT TCCGCCGATA GCGCCACCGA GCGCTTCCGT
TACGGCTTCC TCAAGGGCAA CCCGCAGCTC ACGAAAAACG GCGAGCTCAA ACATCTGTTG
TCGATCGAGG GCTTGCCGAA GGCGATCGTC AATCACATTC TCGACACCGC CGACCAGTTC
GTCAGCGTGA CCGATCGCGA AGTGAAGAAG GTGCCGCTGC TGCGCGGCAA GTCGGTGTTC
AACCTGTTCT TCGAGAACTC GACGCGCACC CGCACCACCT TCGAGATCGC CGCGACGCGT
CTGTCGGCGG ACGTGCTGAA TCTGAACATC AACGCGTCGT CCACGAGCAA GGGCGAGTCG
CTGCTCGACA CGATCAACAA CCTCTCGGCA ATGCATGCCG ATATGTTCGT CGTGCGCCAT
GCATCGAGCG GCGCGCCGTA TCTGATCGCC CAGCATTGCG CGCCGCACGT GCACGTGATC
AATGCCGGCG ACGGCCGTCA TGCGCACCCC ACGCAGGGGC TGCTCGACAT GTACACGATC
CGCCACTACA AGAAGGACTT CACGAAGCTG CGCGTGGCGA TCGTCGGCGA CATTCTGCAC
TCGCGGGTTG CGCGCTCCGA CATTCACGCG CTGACCACGC TTGGCGTGCC GGAAGTGCGC
GCGATCGGTC CGCGCACGCT GTTGCCGGGC GGTCTGGAAC AGATGGGCGT ACGCGTGTTT
CATAACCTCG ACGAAGGCCT GAAGGACGTC GACGTGATCA TCATGCTGCG TCTGCAGAAC
GAACGGATGA GCGGCGCGTT GTTGCCCTCG GCGCAGGAGT ATTTCAAGAG CTGGGGCTTG
ACGCCGGAGC GTCTCGCGCT CGCCGCGCCC GATGCGATCG TGATGCATCC GGGCCCGATG
AATCGTGGCG TCGAAATCGA TTCGCAAGTG GCCGACGGTC CGCAATCGGT GATTCTGAAT
CAGGTGACTT TCGGTATCGC GGTGCGCATG GCGGTGATGG GGATTGTCGC GGGCAATCAC
GATTGA
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| Protein sequence | MNTATQAPKD SADSATERFR YGFLKGNPQL TKNGELKHLL SIEGLPKAIV NHILDTADQF
VSVTDREVKK VPLLRGKSVF NLFFENSTRT RTTFEIAATR LSADVLNLNI NASSTSKGES
LLDTINNLSA MHADMFVVRH ASSGAPYLIA QHCAPHVHVI NAGDGRHAHP TQGLLDMYTI
RHYKKDFTKL RVAIVGDILH SRVARSDIHA LTTLGVPEVR AIGPRTLLPG GLEQMGVRVF
HNLDEGLKDV DVIIMLRLQN ERMSGALLPS AQEYFKSWGL TPERLALAAP DAIVMHPGPM
NRGVEIDSQV ADGPQSVILN QVTFGIAVRM AVMGIVAGNH D
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