Gene Bphyt_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0870 
Symbol 
ID6281935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp968990 
End bp969529 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content66% 
IMG OID642620432 
Productbifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 
Protein accessionYP_001894515 
Protein GI187922873 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.160563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCA TTGACGCCGA AGCGCTTTAT CGCGCGTTGC TCGACCAGAT TCGCGCGGTG 
TATGGCGACC AGCTCGGCGC CGGGCAAGAC GGTGCCGAGG GTGCCGTGCT AGCCGGCATT
TACAGCGGCG GCGCGTGGCT CGCCGAACGG CTGGCGCGCG ACTTGAACCT GCCGAGCTTC
GGTGTGGTGA ACGTCGCGCT GCATCGCGAC GATTACGCGA AAAAAGGCCT GCACTCACAG
GCGAGCCCGA CCTCGCTGCC GTTTTCGGTC GACGGCCGCC GTATCGTGCT GGTCGACGAC
GTTCTCTACA CCGGCCGCAC GATTCGCGCG GCGCTCAACG AACTGTACGA CTACGGCCGC
CCGGCATCGG TCGAGCTGGC GGTGCTCGCC GATCGCGGTG GACGCGAACT GCCGGTGGCG
GCGCGTTTTG TCGGCGGTGT GGTGAACATT CCCGCCGACG CCACACTCGT CCTGGCCCGT
TCGGATAGGG CGCAGGACCA GCCGCGTTTC ACTTTTCACA CTGAAGCACG CGTCGATTGA
 
Protein sequence
MSSIDAEALY RALLDQIRAV YGDQLGAGQD GAEGAVLAGI YSGGAWLAER LARDLNLPSF 
GVVNVALHRD DYAKKGLHSQ ASPTSLPFSV DGRRIVLVDD VLYTGRTIRA ALNELYDYGR
PASVELAVLA DRGGRELPVA ARFVGGVVNI PADATLVLAR SDRAQDQPRF TFHTEARVD