Gene Bphyt_0848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0848 
Symbol 
ID6284667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp947236 
End bp948408 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content54% 
IMG OID642620411 
Productglycosyl transferase group 1 
Protein accessionYP_001894494 
Protein GI187922852 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAT ACAGAGTCTT GGTGATCAAC GATTTCGTGC AAAAGGGTGG TGCCGAAGTG 
GTATACCGGC AGTCCGCTGA CCTTTTGCGA GCTATGGCCG GTGTGGAAGT CGAATGCTTT
CATGCCAGCC GTATCGATGA GAACTCGTCG TTGCTTTCCA AGTCGTGGAA CGTGGCCGCA
GCACGCGCGC TCAAGAAGAT GCTTGCCGGC TATCGTCCCA ACAGGATTCT CGTTCACAAC
TATCACAATG CTTTGTCGGC ATCGGTGTTG GGCGTGATAG CCCGATACAA GCGAGAGTTG
GACTGCGCGA CGTACATGAC ATGTCATGAT TTTCATCTTG TGTATTACAA CCCAACCTTG
CACTACGTGA TGGGTGGCCG TGTAGAACAA TTGACACTCG ATGCGTTGCG GACTAGCCAT
GTACTGACCT TGCGTTCCAG CGCAAAAGGT GTGGTCCATG ATTTCTTTTC GAAAGCATAC
TGGCACGCGG TGCGTGCAAT ACACAAGCCG GAGCGTATCT TCGATCGGAT CATCTGTCCT
AGCGACTTCA TGCAGGAGGC GTTGCACCGG AAGGGCATCG ACAACACGGT AGTCCTTTAC
AATCCTTCCG CGGTCGCAGT AGTGAGCGAA CCGGTAAGCG TCCTGGATCG TAAGGGCTTC
AATATTGCAT TCGTCGGACG CGTCGCTCGT GAGAAGGGAC TCGCGCAGTT TATCGAGCTG
GCCGCATCGA TCGATTTTTC ACGTATTGAA CGCATCGGTG TGTTTGGCGA CGGCGCCGAC
CGCGAGGTGA TCGAGCAACG ATATGCACCT CTTATTGAGT CGGGAAAGCT TGTCTTCTTT
GGTAACTTGC CGCAAGAGCA ACTTTTTTCC AAATTAGGAG CTTTCGCCGA TGCCATCGTG
CTGCCCTCAG TCGGGGTGGA AGTGGCGCCG CTCGTTATTG TTGAAGCCGC GATGCTAGGC
TTGCCCACGT TGATGCGTGA GGGCACGCAT CGGCTGGATT TTGGCGACAC AGTAGGCAGC
AAGATAATGT ATCGCGACGC CCCACAAAGC CTGCAAGCGG CGCTCGAGGA GCTTGCCGCG
CATCTTGCAA CACCGGAGAG ACGGTACGAC GTGAGTGAGT TCTTGCCTCA GTCCTACGCC
GAGCGTTTGG CGAATATTAT GCGTTTGACC TAG
 
Protein sequence
MQKYRVLVIN DFVQKGGAEV VYRQSADLLR AMAGVEVECF HASRIDENSS LLSKSWNVAA 
ARALKKMLAG YRPNRILVHN YHNALSASVL GVIARYKREL DCATYMTCHD FHLVYYNPTL
HYVMGGRVEQ LTLDALRTSH VLTLRSSAKG VVHDFFSKAY WHAVRAIHKP ERIFDRIICP
SDFMQEALHR KGIDNTVVLY NPSAVAVVSE PVSVLDRKGF NIAFVGRVAR EKGLAQFIEL
AASIDFSRIE RIGVFGDGAD REVIEQRYAP LIESGKLVFF GNLPQEQLFS KLGAFADAIV
LPSVGVEVAP LVIVEAAMLG LPTLMREGTH RLDFGDTVGS KIMYRDAPQS LQAALEELAA
HLATPERRYD VSEFLPQSYA ERLANIMRLT