Gene Bphyt_0839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0839 
Symbol 
ID6282012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp932698 
End bp933864 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content65% 
IMG OID642620402 
ProductCBS domain containing membrane protein 
Protein accessionYP_001894485 
Protein GI187922843 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCCGCT ACGCTCTCAT CCGCTGGCTC GCCAGCTTCG CCCCGCATCC CATGGCCGTC 
CGGTGGCCGG AACGCCTGAG ATCGTGTGTC GGCGCATTGC TCGGCATCGC GTTCACCGGC
GGGACCATGC ACGTCCTTCT CGGACCGGCG GCAAATATTC CATTGCTGGT CGCACCAATG
GGCGCTTCGG CCGTGCTGCT GTTCGCGGTT CCCGCAAGTC CGCTCGCGCA ACCGTGGTCG
ATTATCGGCG GCAATATCGT CTCCGCTACG GTCGGCGTGG CCTGTGCGAG CTGGATCGGC
GATCCGGTGG GCGCAGCCGC TTTGGCCGTT GCGCTGGCGA TTTGTGCGAT GTTTGCGCTG
CGTTGTGTCC ACCCGCCGTC GGGCGCCGTT GCGCTGACCG CGGTTCTCGG CGGTCCAGCG
GTGCACGCGC TGGGCTATCG CTTCGTGGCC GAGCCGATTG CGATCCAGTC GGTGACGCTG
CTATGCGCTG CCATCGTCTA CCACGCCGCT ACCGGGCATC GATACCCCCA CGTCGCCCAG
GCGAGCTCGC TCAAAGGCGC GGGAGCATCG GCCTCGGCGT CGAGCGAAGG TTTCACGCGC
GCAGACCTCG AAGCGGTGCT GAACCGGCGC GGCGAATTGC TCGATATCGA TACGGACGAT
CTGGAATCCC TGCTGCGCGA CGTGCAGTTG CAGGCCTATG CCCGCACGTT CAATGAACTG
ACCTGCGCGG ACATCATGTC GCGGTCGCTC GTCGCCGTGT CGGCAACCAC GCGTGCTTCC
GCCGCATGGA GCCTGCTGAA ACAGCGCCAT ATCAAGGCAC TGCCGGTCAC CGACGAGAAG
CAGCATGTGA TCGGCATCGT GACCCGTGCC GACCTTGTGG ACAAACGGGC ATTCGGCAAA
GCGCCCGGCC AAACCTCTCC CATGAAACGC TGGTTCAGGC GCAGCGTCAC TCCGGCGCCG
CTCGTTGGCG CACTCATGAA CGTGGACGTT CAGACCGTCG AAGGAACCAC CCCGATCGTC
GAATTGGTGC CGGTGTTTGC GAACTACGGG CACCACCACA TCCCGGTTCT GGACTCGCAA
CAGCGGCTTG CCGGCATGAT CACGCAGGCC GATCTCATCG CGGGACTGTA TCGCCAGGCT
TACGCCAGGC AGCGAACCGC GGCATAG
 
Protein sequence
MSRYALIRWL ASFAPHPMAV RWPERLRSCV GALLGIAFTG GTMHVLLGPA ANIPLLVAPM 
GASAVLLFAV PASPLAQPWS IIGGNIVSAT VGVACASWIG DPVGAAALAV ALAICAMFAL
RCVHPPSGAV ALTAVLGGPA VHALGYRFVA EPIAIQSVTL LCAAIVYHAA TGHRYPHVAQ
ASSLKGAGAS ASASSEGFTR ADLEAVLNRR GELLDIDTDD LESLLRDVQL QAYARTFNEL
TCADIMSRSL VAVSATTRAS AAWSLLKQRH IKALPVTDEK QHVIGIVTRA DLVDKRAFGK
APGQTSPMKR WFRRSVTPAP LVGALMNVDV QTVEGTTPIV ELVPVFANYG HHHIPVLDSQ
QRLAGMITQA DLIAGLYRQA YARQRTAA