Gene Bphyt_0837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0837 
Symbol 
ID6282010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp930398 
End bp932188 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content65% 
IMG OID642620400 
ProductChloride channel core 
Protein accessionYP_001894483 
Protein GI187922841 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCG ATACCCATAA GCGCGATTTT TCCGTCAACG CGCGGCTTCC CGGCATTTCC 
GCACTCGCCG CCGGAATCGG CGCGCTCAGC ACGCTCGCGG CGTTCGTGCT GCTGAGCCTG
ATTCATCTGT TCACCAATCT GTTTTTCTTC CAGCAGTTTT CGTTTGCGGA CCGCTCGCCT
GCCGTCAATA CGTTGGGTGT CTGGGTAGTG GTCATCCCTG TGATCGGCGG CCTGATCGTC
GGTCTGATGG CGCGCTACGG TTCGGAGAAG ATTCGCGGTC ACGGCATTCC CGAAGCGATT
GAAGCCATTC TGTTCGGCAA GAGCCGCATG TCGCCGAAGG TGGCGATTCT CAAACCGTTG
TCGTCCGGCA TCGTGATCGG CAGCGGTGGG CCGTTCGGCG CGGAAGGCCC GATCATCATG
ACGGGCGGCG CACTGGGCTC GCTGATCGCT CAGTGCGTGA AGGTCACCGC CGCGGAACGC
AAGACGCTGC TGGTGGCCGG CGCGGCGGCG GGCATGACGG CGGTCTTCGG CACGCCCGTG
GCGGCCGTGC TGCTGGCAGT CGAACTGCTG CTGTTCGAAT GGCGTCCGCG CAGTTTCCTG
CCGGTCGCGC TGGCATGCGC CGTCGCGGGT TTTGCGCGCG CGGCATTCTT CGGCACGGGC
CCGCTGTTTC CGCTCGAAAC CGCGCCGCCC GGCGCGCTGT CGCTGCTGTC CTGCGTCGTC
GCCGGCTTGC TGTCCGGCGC GCTTGCCTCG GGCTTGTCGG CCGCGCTTTA TAAAGTCGAG
GACCTGTTCG GCAAGCTGCC GATTCACTGG ATGTGGTGGC CCGCGCTCGG CGGACTCGTC
GTCGGCATTG GCGGCTTTCT TGAGCCGCGT GCGCTGGGCG TCGGTTACGA CGTGATCGGC
GATCTGTTGC ATCAGCACAT TGCCATCCAG ATCGCGCTGG CAATCCTCAT CGTAAAGGCT
GTCATCTGGG TCGTCGCGCT CGGCTCGGGC ACCTCGGGTG GCGTGCTCGC TCCGTTGCTC
ATGTTGGGCG CCGGACTCGG CGTCCTGCTC GGGCACGTGC TGCCCGGCGG CGAACCCGCA
CTGTGGCCGC TCGTCTGCAT GGCGGCCACG CTCGGCGCCA CGTTGGGCGC GCCGTTGACC
GCCATCGTGT TCGCCTTCGG TCTGACGCAC GACAGCAACG CCCTGCTGCC GCTGCTGGCC
GCGACACTGA TCGCGCACGG GTTCGCAACG GTCGTCATGA AGCGTTCCAT CATGACCGAG
AAAATCGCCC GGCGCGGGTA TCACATCTAC CGGGAATACG GTGTCGATCC ACTCGAACGG
CACCATGTCG ACGAGGTGAT GTCGCGCACG GTCAAGACGA TCGATGGCGA CATGTCCGTG
GCAGAAGCGC TGGCAACGTA CTTCGGCGCG ACGCAGACAC ATCGCGCTTA TCCGGTGGTG
CGCCAAGGCG CGCTGGTGGG CGTCGTCGAT CGCGCGGTGC TGGAGGCAAT CCGCGACGAC
GAGACGCACA ATACGCTCGA CTCGCGACTC GCCGATATAT TGCGGCACCG TTCGCCCACT
TTCGCGCTGC CCGGTGAAAC CTGCCGCCTC GTCGCCACGC GGCTTGCGGT GCACGGTCTC
GAACGTTTGC CCGTGGTTGC GGATTCCACC ACGTTGCAAC TGATCGGCAT CGTGTCGCGC
AGCGATCTGA TCAAACCGTC TCTTGCGCAC TTCGACGAAG AGCACAAGAA AGAGCGCTTC
CGGCGCTTGC GGATGCACAC CGGCAAGCGG CACTTCCCGC CGGTTCCGTA A
 
Protein sequence
MSFDTHKRDF SVNARLPGIS ALAAGIGALS TLAAFVLLSL IHLFTNLFFF QQFSFADRSP 
AVNTLGVWVV VIPVIGGLIV GLMARYGSEK IRGHGIPEAI EAILFGKSRM SPKVAILKPL
SSGIVIGSGG PFGAEGPIIM TGGALGSLIA QCVKVTAAER KTLLVAGAAA GMTAVFGTPV
AAVLLAVELL LFEWRPRSFL PVALACAVAG FARAAFFGTG PLFPLETAPP GALSLLSCVV
AGLLSGALAS GLSAALYKVE DLFGKLPIHW MWWPALGGLV VGIGGFLEPR ALGVGYDVIG
DLLHQHIAIQ IALAILIVKA VIWVVALGSG TSGGVLAPLL MLGAGLGVLL GHVLPGGEPA
LWPLVCMAAT LGATLGAPLT AIVFAFGLTH DSNALLPLLA ATLIAHGFAT VVMKRSIMTE
KIARRGYHIY REYGVDPLER HHVDEVMSRT VKTIDGDMSV AEALATYFGA TQTHRAYPVV
RQGALVGVVD RAVLEAIRDD ETHNTLDSRL ADILRHRSPT FALPGETCRL VATRLAVHGL
ERLPVVADST TLQLIGIVSR SDLIKPSLAH FDEEHKKERF RRLRMHTGKR HFPPVP