| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0827 |
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| Symbol | |
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| ID | 6284386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 917599 |
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| End bp | 919338 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642620390 |
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| Product | GMC oxidoreductase |
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| Protein accession | YP_001894473 |
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| Protein GI | 187922831 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.705708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCATCG ATACACGTAC TGTTGAACAG AACACCGTCG TCGAGACGAC GGTCTGCATC
ATCGGCGGAG GGGTCGCGGG CATTACGCTC GCGCTCGAAA TGTCGAGGGC GGGTATCGAC
GCCTGCATGC TCGAAAGCGG TGGCTTTGGA CCTGACGACG CAACTCGCGA CCTCTATCGC
GGCGAGAACA TCGGCCTTCC CTACACGTTC GCGGACGGCT CGCGCAGCCG CTATTTCGGC
GGCAGCAGCA ACTGCTGGGG CGGCTGGTGC CGCCCGCTCG ATCCCTGGGA CTTCGAAAAG
CGCGACTGGA TTGCGCACAG CGGCTGGCCG TTCGGCCTCG ATGAACTGGC GCCTTACTAT
GCACGCACGC ATGAACTGCT GAAGCTCGGT CCGCAGAATT TCGACCCCGC CTACTGGGAG
CGCGAGATTG GCCGTCAGGA CGTGCGCCGT CTGCCGCTCG CCACCGGCGA CATGCGCGAT
ACGGTTGCGC AGTTCAGTCC GCCGGTTCGC TTCGGCAAGG CGTATCGCGA AGAACTGTCG
CATTCGACGC GGGTCCGCGT GTTCCTGCAT GCAAACGTGC TCAGTATCGA CGCCGACGCG
CAGGGCACGA CGATTTCGAA ACTGAAGGTG GGCACCATCA GCGGCCGCGC GATAACGGTG
ACCGCGAGAA TTTTCGTGCT GGCCACGGGC GGTATCGAAA ACGCGCGCCT TCTGCTGGCA
TCGAACAACG TGCAGGCGGC CGGACTCGGC AATGCCAACG ATCTGGTCGG CCGTTACTTC
ATGGATCATC CGCGCATGAT GTCGGGCAAG GTGCGCTTCC GTCCGGGCAT CGCGCGCAAC
AAGCTATACG ACATCAAGTA CCACTACCAG AATGTGGCTG TCTCGGCGCA CGGCACGAAG
ATCTCGTCGC AGTTCGCGCC GAAGCAGGAG TGGATGGAAC GCGAGAAGCT GCTCAATTCG
CGGGTGTGGC TCTACTCGAA ATGGTACGGC GAGGGCAGCG CGGGCTCCGA GGCGCTGATC
CGTTTCAAGG AAGCGCTGAT GGGCAAGGAT CAGCCCGGCC GCAGCGTGAG GCGCGACATC
GAGACCATGA TCGCGCACCC GCTGGACACT GTCGGTTTCG GTTTGACGCG GCTGTTGCAA
TGGCCCGCGT TGATCACCGA CGTGACGCTG CAGGCCATCG TCGAAGCGGA GCCCAATCCG
GATAGCCGGG TGACCTTGTC GGCCGACAAG CGCGACCACT TCGGCATGCC GCGCGTGCGG
GTGGAGTGGC GTCTCGGCGA CCAGGTGCAG CGCACTTTCG ACAAGACGTT CCAGTTGCTC
GCGCAGGAAT TGCAGATGGC GAACGTCGCG GACGTCACGC TCGATGAGCC GCTCGAAGGC
CGGATGTGGC CGGCGAAGCT TGAAGGCACG TGGCACCACA TGGGCACCAC GCGCATGCAC
GATTCGCCGC GCGAGGGCGT GGTCGATCGC GACTGCAAGG TGCATGGGAT CAGCAATCTT
TACATTGGCG GCAGCTCGGT GTTTCCGACC GTCGGCGCCA ATTTCCCGAC TATCACGATT
GCCGCGCTGT CGTTGCGTCT CGCCGGCCAT CTGATGCGGC AGCTCAATGT GCCGGACGCC
GTCGGCAGTA CGCGAGGCGA AGCAGCCAAC AGCACCACCA TGTCGCTTCA GACACCGCCG
CAGGTCGACA CGTTGCCGAT CGCGGCTTCG ACCTTGACGC CGCTGATGAA AGAGCAGTGA
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| Protein sequence | MFIDTRTVEQ NTVVETTVCI IGGGVAGITL ALEMSRAGID ACMLESGGFG PDDATRDLYR
GENIGLPYTF ADGSRSRYFG GSSNCWGGWC RPLDPWDFEK RDWIAHSGWP FGLDELAPYY
ARTHELLKLG PQNFDPAYWE REIGRQDVRR LPLATGDMRD TVAQFSPPVR FGKAYREELS
HSTRVRVFLH ANVLSIDADA QGTTISKLKV GTISGRAITV TARIFVLATG GIENARLLLA
SNNVQAAGLG NANDLVGRYF MDHPRMMSGK VRFRPGIARN KLYDIKYHYQ NVAVSAHGTK
ISSQFAPKQE WMEREKLLNS RVWLYSKWYG EGSAGSEALI RFKEALMGKD QPGRSVRRDI
ETMIAHPLDT VGFGLTRLLQ WPALITDVTL QAIVEAEPNP DSRVTLSADK RDHFGMPRVR
VEWRLGDQVQ RTFDKTFQLL AQELQMANVA DVTLDEPLEG RMWPAKLEGT WHHMGTTRMH
DSPREGVVDR DCKVHGISNL YIGGSSVFPT VGANFPTITI AALSLRLAGH LMRQLNVPDA
VGSTRGEAAN STTMSLQTPP QVDTLPIAAS TLTPLMKEQ
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